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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu4101 and Atu4102 are separated by 76 nucleotides
Atu4102 and Atu8037 are separated by 152 nucleotides
Atu8037 and Atu4103 are separated by 226 nucleotides
Atu4103 and Atu4104 are separated by 169 nucleotides
Atu4101: Atu4101 - hypothetical protein, at 1,220,530 to 1,221,033
Atu4101
Atu4102: Atu4102 - tRNA-Ala, at 1,221,110 to 1,221,185
Atu4102
Atu8037: Atu8037 - hypothetical protein, at 1,221,338 to 1,221,727
Atu8037
Atu4103: Atu4103 - cytidylate kinase, at 1,221,954 to 1,222,586
Atu4103
Atu4104: Atu4104 - 30S ribosomal protein S1, at 1,222,756 to 1,224,456
Atu4104
Group
Condition
Atu4101
Atu4102
Atu8037
Atu4103
Atu4104
phage
AgroPhage_E10
-0.8
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.7
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.7
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.7
N.D.
N.D.
N.D.
N.D.
phage
AgroPhage_F10
-0.6
N.D.
N.D.
N.D.
N.D.
phage
AgroPhage_D07
-0.6
N.D.
N.D.
N.D.
N.D.
no phage
P4L5
-0.6
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.5
N.D.
N.D.
N.D.
N.D.
phage
AgroPhage_A07
-0.5
N.D.
N.D.
N.D.
N.D.
no phage
P3L4
-0.5
N.D.
N.D.
N.D.
N.D.
phage
AgroPhage_A01
-0.5
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.5
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.5
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.5
N.D.
N.D.
N.D.
N.D.
nitrogen source
Putrescine (N)
-0.4
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
+0.4
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.4
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.4
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
+0.4
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.5
N.D.
N.D.
N.D.
N.D.
stress
Erythromycin 6.25 ug/mL
+0.5
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.5
N.D.
N.D.
N.D.
N.D.
in planta
Bethi_Library_OD0.01
+0.5
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.5
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.5
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.5
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.6
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.6
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.7
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+1.0
N.D.
N.D.
N.D.
N.D.
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