Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3217 and Atu3218 are separated by 125 nucleotidesAtu3218 and Atu8029 are separated by 169 nucleotidesAtu8029 and Atu3219 are separated by 81 nucleotidesAtu3219 and Atu3221 are separated by 243 nucleotides Atu3217: Atu3217 - aspartate aminotransferase, at 231,610 to 232,728 Atu3217 Atu3218: Atu3218 - hypothetical protein, at 232,854 to 233,129 Atu3218 Atu8029: Atu8029 - hypothetical protein, at 233,299 to 233,427 Atu8029 Atu3219: Atu3219 - dihydroxy-acid dehydratase, at 233,509 to 235,320 Atu3219 Atu3221: Atu3221 - hypothetical protein, at 235,564 to 235,752 Atu3221
Group Condition Atu3217 Atu3218 Atu8029 Atu3219 Atu3221
carbon source D-Galacturonic Acid (C) +0.0 +0.1 -0.1 -7.2 N.D.
carbon source D-Galacturonic Acid (C) +0.1 -0.0 +0.1 -6.6 N.D.
carbon source D-Galactose (C) +0.0 -0.1 -0.1 -6.1 N.D.
carbon source methyl-beta-L-arabinopyranoside (C) +0.0 -0.3 -0.7 -5.2 N.D.
carbon source methyl-beta-L-arabinopyranoside (C) +0.0 -0.2 +0.2 -6.0 N.D.
carbon source D-Galactose (C) +0.1 +0.2 +0.2 -6.3 N.D.
carbon source L-Arabinose (C) -0.1 -0.0 -0.4 -5.1 N.D.
carbon source L-Arabinose (C) +0.1 -0.2 -0.2 -5.1 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.1 +0.0 -2.3 -1.3 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.5 -0.9 -1.8 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.5 -1.3 -1.6 N.D.
carbon source Melibiose (C) -0.1 -0.1 +0.1 -3.2 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.2 -1.8 -1.8 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.6 -1.1 -1.3 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 +0.4 -1.6 -1.1 N.D.
carbon source Methyl-B-D-galactopyranoside (C) +0.2 -0.2 -0.0 -2.9 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.2 -0.2 -2.6 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.1 -1.3 -1.7 N.D.
carbon source Methyl-B-D-galactopyranoside (C) -0.2 +0.2 +0.2 -2.9 N.D.
carbon source Melibiose (C) -0.0 -0.0 +0.6 -3.0 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.9 +0.4 +0.3 -1.9 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.5 -0.9 -1.9 N.D.
carbon source Stachyose (C) +0.2 -0.1 +0.6 -2.7 N.D.
carbon source Rhamnogalacturonan - from potato (C) -0.0 +0.1 +0.9 -2.1 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.4 +1.2 -2.0 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.1 +1.0 -1.7 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.3 +1.9 -1.0 N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.2 +2.4 -0.8 N.D.
nitrogen source DL-2-Aminobutyric (N) +0.4 -0.0 -0.8 +2.9 N.D.
stress R2A with tungstate 375 mM -0.1 +0.4 +4.7 +0.3 N.D.
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