Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1776 and Atu1777 are separated by 59 nucleotidesAtu1777 and Atu8020 are separated by 100 nucleotidesAtu8020 and Atu1778 are separated by 17 nucleotidesAtu1778 and Atu1779 are separated by 3 nucleotides Atu1776: Atu1776 - hypothetical protein, at 1,760,890 to 1,761,693 Atu1776 Atu1777: Atu1777 - hypothetical protein, at 1,761,753 to 1,762,097 Atu1777 Atu8020: Atu8020 - hypothetical protein, at 1,762,198 to 1,762,476 Atu8020 Atu1778: Atu1778 - transcription-repair coupling factor, at 1,762,494 to 1,765,991 Atu1778 Atu1779: Atu1779 - hypothetical protein, at 1,765,995 to 1,766,306 Atu1779
Group Condition Atu1776 Atu1777 Atu8020 Atu1778 Atu1779
stress R2A with Ceftazidime 4 mM -0.2 -0.5 -0.2 -0.6 -0.9
no phage P2L5 +0.0 -0.9 -0.5 -0.2 -0.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.5 -0.9 -0.3 -0.6 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.5 -0.7 -0.7 -0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 +0.4 -0.6 -0.4 -0.5 -1.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.1 +0.3 -0.8 -1.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.4 -0.3 -0.8 -0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 +0.4 -0.1 -0.1 -0.6 -1.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.8 +0.1 -0.5 -0.8
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.6 +0.5 -0.4 -1.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 +0.2 +0.5 -0.4 -1.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.5 +0.4 -0.3 -0.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 +0.2 +0.2 +0.4 -0.9 -0.9
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.4 +0.9 -0.7 -0.7
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.7 -0.3 -0.6 +0.8
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -1.1 +0.9 -0.4 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +1.5 +0.3 -0.4 -1.8
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.9 +0.6 -0.3 -1.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 +0.3 +0.9 -0.5 -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +1.2 +0.3 -0.7 -0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.7 -0.0 -0.9 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.6 +1.3 -0.5 +0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 +0.8 +0.5 -0.6 +0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 -0.6 +0.2 -0.2 +1.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.3 +1.3 -0.2 +0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.4 -0.0 -0.5 +1.7
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.3 +0.4 -0.4 +1.9
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.5 +0.4 -0.6 +1.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 +0.2 -0.2 +0.0 +2.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 -0.1 -0.1 +0.1 +2.3
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