Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0768 and Atu0769 are separated by 389 nucleotidesAtu0769 and Atu8013 overlap by 1 nucleotidesAtu8013 and Atu0770 are separated by 28 nucleotidesAtu0770 and Atu0771 are separated by 61 nucleotides Atu0768: Atu0768 - cytochrome-c oxidase chain I, at 763,517 to 765,226 Atu0768 Atu0769: Atu0769 - protoheme IX farnesyltransferase, at 765,616 to 766,569 Atu0769 Atu8013: Atu8013 - hypothetical protein, at 766,569 to 766,700 Atu8013 Atu0770: Atu0770 - cytochrome C oxidase assembly protein, at 766,729 to 767,346 Atu0770 Atu0771: Atu0771 - cytochrome c oxidase subunit III, at 767,408 to 768,283 Atu0771
Group Condition Atu0768 Atu0769 Atu8013 Atu0770 Atu0771
carbon source D-Galacturonic Acid (C) -2.9 -4.8 N.D. -2.4 -2.1
carbon source NAG (C) -2.7 -3.7 N.D. -2.7 -2.7
carbon source D-Galacturonic Acid (C) -3.4 -2.6 N.D. -2.8 -2.3
carbon source L-Sorbose (C) -2.9 -2.9 N.D. -2.6 -2.6
carbon source NAG (C) -2.2 -3.3 N.D. -2.6 -2.8
carbon source L-Sorbose (C) -2.7 -2.5 N.D. -2.6 -2.3
carbon source D-Arabinose (C) -1.6 -3.8 N.D. -1.1 -1.3
carbon source D-(-)-lyxose (C) -1.1 -3.9 N.D. -1.1 -1.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.4 -1.7 N.D. -2.6 -1.6
carbon source D-Saccharic potassium salt (C) -1.9 -1.2 N.D. -1.7 -2.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.9 -1.7 N.D. -2.2 -1.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.3 -1.3 N.D. -1.9 -1.5
carbon source D-(-)-lyxose (C) -1.2 -3.1 N.D. -1.4 -1.3
carbon source L-Xylose (C) -1.6 -2.2 N.D. -1.5 -1.5
carbon source Xylitol (C) -1.3 -3.4 N.D. -1.1 -0.9
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.7 -1.7 N.D. -1.1 -1.2
carbon source L-Xylose (C) -1.5 -2.1 N.D. -1.8 -1.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.9 -1.6 N.D. -1.6 -1.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.8 -1.2 N.D. -2.0 -1.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.9 -1.5 N.D. -1.6 -1.6
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.1 -2.8 N.D. -0.8 -1.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.0 -1.2 N.D. -1.5 -1.7
carbon source D-Saccharic potassium salt (C) -1.7 -1.3 N.D. -1.5 -1.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.1 -3.9 N.D. -0.5 -0.8
stress methyl jasmonate 5 mM -1.3 -4.2 N.D. -0.2 -0.4
stress methyl jasmonate 5 mM -1.3 -4.1 N.D. -0.2 -0.5
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -4.5 N.D. -0.3 -0.7
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -4.6 N.D. -0.6 -0.4
stress R2A with Vancomycin 0.009 mM +2.9 +5.4 N.D. +0.5 +0.9
stress R2A with Vancomycin 0.009 mM +3.6 +5.7 N.D. +1.0 +1.3
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