Fitness for 3 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu6195	Atu6196	Atu6197
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.5	-0.1	-1.1
nitrogen source	5-Aminolevulinic (N)	-2.3	+0.2	+0.5
no phage	P1L4	-0.9	-0.2	-0.5
carbon source	Melibiose (C)	-0.7	-0.2	-0.5
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.7	-0.2	-0.5
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	-0.6	-0.3	-0.5
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.7	-0.1	-0.5
nitrogen source	Hydantoin (N)	-0.9	+0.2	-0.6
nitrogen source	L-Ornithine (N)	-0.5	-0.2	-0.6
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-1.0	-0.0	-0.3
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.5	-0.1	-0.6
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	-0.5	-0.5	-0.2
no phage	P4L5	-0.6	+0.1	-0.7
nitrogen source	Nicotinamide (N)	-0.6	+0.2	-0.6
carbon source	Mannobiose (C)	-0.5	+0.2	-0.5
carbon source	D-Glucosamine Hydrochloride (C)	+0.3	-0.2	-0.7
nitrogen source	L-Histidine (N)	+0.4	-0.0	-0.8
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	+0.5	-0.2	-0.6
nitrogen source	Urea (N)	+0.7	-0.2	-0.6
nitrogen source	L-pyroglutamic (N)	-0.6	+0.2	+0.5
carbon source	Rhamnogalacturonan - from potato (C)	+0.3	-0.6	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.9	-0.1	-0.6
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.4	+0.2	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.2	+0.1	-0.8
carbon source	D-Saccharic potassium salt (C)	-0.2	-0.0	+1.0
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+1.6	-0.0	-0.3
carbon source	D-Saccharic potassium salt (C)	+0.1	+0.3	+0.9
nitrogen source	5-Aminovaleric (N)	+0.5	+0.4	+0.4
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.8	-0.0	+0.6
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.8	+0.2	+0.7