Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu6153	Atu6154	Atu6155	Atu6156	Atu6157
	No phage control	-0.6	-0.3	-0.1	-1.1	-0.9
nitrogen source	Putrescine (N)	-2.1	-0.1	-0.1	-0.8	+0.1
nitrogen source	Nicotinamide (N)	-0.2	+0.1	-0.3	-1.7	-0.2
nitrogen source	spermidine (N)	-0.8	+0.1	-0.4	-1.2	+0.0
nitrogen source	6-aminocaproic (N)	-0.5	-0.3	-0.6	-0.4	-0.3
stress	Chloramphenicol 12.5 ug/mL	-0.3	-0.4	-0.3	-0.5	-0.5
nitrogen source	Hydantoin (N)	-1.1	+0.1	-0.3	+0.1	-0.8
	Atjh15	-0.1	-0.2	-0.7	-0.1	-0.6
in planta	Bethi_Library_OD1.0	-1.4	-0.0	-0.2	-0.2	+0.0
carbon source	Rhamnogalacturonan - from potato (C)	-0.4	-0.2	-0.1	-0.7	-0.4
stress	R2A with Tetracycline 0.002 mM	-0.6	-0.3	-0.1	-0.3	-0.5
nitrogen source	L-Aspartic Acid (N)	-0.5	-0.1	-0.4	-0.8	+0.0
nitrogen source	Orotic (N)	-0.6	+0.2	+0.2	-1.0	-0.5
	Atjh14	-1.3	+0.3	-0.3	-0.2	-0.0
stress	R2A with G418 disolution 0.02 mM	-1.0	-0.1	-0.2	+0.3	-0.4
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.6	+0.0	-0.2	+0.3	-0.7
phage	AgroPhage_E04	-1.0	-0.3	+0.1	-0.2	+0.2
nitrogen source	L-Phenylalanine (N)	-1.2	-0.1	+0.0	+0.4	-0.2
carbon source	D-Saccharic potassium salt (C)	-0.4	-0.2	+0.5	+0.0	-0.8
nitrogen source	L-Phenylalanine (N)	-0.5	+0.2	-0.3	-0.6	+0.4
nitrogen source	L-Aspartic Acid (N)	-0.9	+0.2	+0.3	-0.0	-0.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-1.1	+0.2	+0.0	+0.4	-0.1
in planta	Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days	-0.8	-0.1	-0.2	+0.5	+0.1
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-1.0	+0.1	+0.1	+0.2	+0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.2	+0.7	-0.5	-0.2
carbon source	2-Keto-D-gluconic hemicalcium salt (C)	-0.9	+0.2	+0.1	+0.4	+0.2
nitrogen source	L-Methionine (N)	+0.6	+0.2	+0.2	-0.1	-0.6
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.9	+0.0	+0.5	-0.1	-1.1
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.2	-0.4	+0.5	+0.7
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.4	+0.4	-0.6	+1.1