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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu6140 and Atu6141 overlap by 4 nucleotides
Atu6141 and Atu6142 overlap by 4 nucleotides
Atu6142 and Atu6143 overlap by 8 nucleotides
Atu6143 and Atu6144 are separated by 15 nucleotides
Atu6140: Atu6140 - ABC transporter, nucleotide binding/ATPase protein (agrocinopine), at 159,963 to 160,862
Atu6140
Atu6141: Atu6141 - ABC transporter, nucleotide binding/ATPase protein (agrocinopine), at 160,859 to 161,878
Atu6141
Atu6142: Atu6142 - ABC transporter, membrane spanning protein (agrocinopine), at 161,875 to 162,801
Atu6142
Atu6143: Atu6143 - ABC transporter, membrane spanning protein (agrocinopine), at 162,794 to 163,654
Atu6143
Atu6144: Atu6144 - agrocinopine phosphodiesterase, at 163,670 to 164,470
Atu6144
Group
Condition
Atu6140
Atu6141
Atu6142
Atu6143
Atu6144
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0
-1.3
-1.4
-1.4
-1.4
-2.7
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0
-1.2
-1.2
-1.2
-1.1
-2.4
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0
-1.3
-1.3
-1.1
-1.1
-2.4
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075
-1.1
-0.7
-0.8
-0.9
-3.5
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0
-1.1
-1.1
-1.1
-1.4
-2.1
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.8
-0.8
-0.8
-0.9
-3.0
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075
-1.0
-0.5
-0.8
-0.7
-3.1
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075
-0.9
-0.8
-0.7
-0.9
-2.8
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.6
-0.5
-0.7
-0.8
-2.9
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.7
-0.7
-0.6
-0.9
-2.6
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075
-0.7
-0.5
-0.6
-0.7
-2.7
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075
-0.5
-0.6
-0.8
-0.8
-2.6
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.7
-0.7
-0.9
-0.9
-1.8
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0
-0.8
-0.9
-0.7
-0.9
-1.6
no phage
P4L4
-0.7
-0.7
-0.7
-0.9
-1.5
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.5
-0.4
-0.4
-0.6
-1.9
no phage
P2L4
-0.5
-0.5
-0.7
-0.8
-1.2
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.4
-0.7
-0.4
-0.5
-1.3
in planta
Bethi_Library_OD0.01
-0.2
-0.4
-0.4
-0.3
-1.8
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.6
-0.6
-0.5
-0.3
-1.0
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.5
-0.6
-0.5
-0.3
-1.1
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.6
-0.3
-0.6
-0.4
-1.0
in planta
Bethi_Library_OD0.1
-0.3
-0.3
-0.2
-0.4
-1.6
in planta
Bethi_Library_OD0.01
-0.3
-0.3
-0.2
-0.4
-1.6
no phage
P3L4
-0.4
-0.4
-0.5
-0.5
-0.9
no phage
P1L4
-0.3
-0.5
-0.5
-0.4
-1.0
no phage
P2L5
-0.1
-0.6
-0.5
-0.5
-0.8
in planta
Bethi_Library_OD0.05
-0.1
-0.3
-0.2
-0.3
-1.5
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.4
-0.4
-0.2
-0.2
-1.2
no phage
P4L5
-0.4
-0.6
-0.2
-0.3
-0.8
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