Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu6135 and Atu6136 are separated by 51 nucleotidesAtu6136 and Atu6137 are separated by 13 nucleotidesAtu6137 and Atu6138 are separated by 231 nucleotidesAtu6138 and Atu6139 are separated by 57 nucleotides Atu6135: Atu6135 - Sucrose phosphorylase-like protein, at 153,761 to 155,218 Atu6135 Atu6136: Atu6136 - Na+/phosphate symporter, at 155,270 to 156,922 Atu6136 Atu6137: Atu6137 - hypothetical protein, at 156,936 to 157,232 Atu6137 Atu6138: Atu6138 - Repressor of the acc and arc operons, at 157,464 to 158,240 Atu6138 Atu6139: Atu6139 - ABC transporter, substrate binding protein (agrocinopines A and B), at 158,298 to 159,863 Atu6139
Group Condition Atu6135 Atu6136 Atu6137 Atu6138 Atu6139
stress R2A with Manganese (II) chloride tetrahydrate 5 mM -0.1 +0.0 -0.2 -4.2 -0.1
stress R2A with Manganese (II) chloride tetrahydrate 5 mM -0.0 -0.0 -0.2 -3.9 -0.0
carbon source L-ascorbate (C) -0.0 -0.1 -0.4 -2.8 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 +0.0 +0.1 +0.1 -0.8 -1.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 +0.2 +0.1 +0.1 -1.0 -1.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 +0.1 +0.2 +0.1 -0.9 -1.2
nitrogen source Betaine (N) -0.3 +0.0 -0.2 +1.6 -0.3
nitrogen source Hydantoin (N) -0.5 -0.1 -0.1 +1.9 -0.2
carbon source 2-Keto-D-gluconic hemicalcium salt (C) -0.3 -0.1 -0.2 +1.7 -0.1
nitrogen source L-Histidine (N) -0.3 -0.1 -0.2 +1.7 -0.0
nitrogen source L-Aspartic Acid (N) -0.5 -0.0 -0.2 +1.7 +0.1
nitrogen source spermidine (N) -0.3 +0.1 +0.2 +1.6 -0.2
carbon source D-Saccharic potassium salt (C) +0.3 -0.1 -0.5 +2.0 -0.3
carbon source D-Saccharic potassium salt (C) -0.2 -0.3 +0.1 +1.9 +0.1
nitrogen source L-Methionine (N) -0.3 -0.0 +0.3 +1.7 -0.0
nitrogen source 6-aminocaproic (N) +0.2 +0.1 -0.1 +1.8 -0.2
carbon source D-Sorbitol (C) +0.1 -0.2 -0.1 +2.1 -0.0
carbon source D-Mannitol (C) +0.1 +0.0 +0.2 +1.8 -0.2
nitrogen source Hydantoin (N) -0.2 +0.1 +0.3 +2.0 -0.3
nitrogen source Nicotinamide (N) -0.4 +0.2 +0.3 +1.8 +0.0
carbon source Protocatechuic Acid (C) -0.1 +0.0 +0.0 +2.1 +0.1
carbon source D-Glucose (C) +0.0 -0.1 +0.0 +2.1 +0.1
carbon source Protocatechuic Acid (C) -0.3 -0.1 +0.0 +2.5 -0.0
carbon source D-Glucosamine Hydrochloride (C) +0.2 -0.1 +0.2 +2.0 -0.1
carbon source D-Glucosamine Hydrochloride (C) -0.1 -0.0 +0.2 +2.1 +0.0
nitrogen source L-Valine (N) -0.2 +0.1 +0.3 +2.0 +0.1
nitrogen source nitrate (N) +0.1 -0.0 +0.1 +2.5 -0.1
carbon source L-Alanine (C) +0.1 +0.1 +0.2 +2.2 -0.1
nitrogen source nitrate (N) -0.1 +0.0 +0.3 +2.7 -0.0
carbon source sarcosine (C) +0.0 +0.1 +0.1 +3.6 -0.1
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