Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu6120	Atu6121	Atu6122	Atu6123	Atu6124
nitrogen source	Nicotinamide (N)	-0.6	-0.2	-0.2	-1.0	-0.1
nitrogen source	D-Glucosamine Hydrochloride (N)	-0.3	-0.8	+0.2	-0.7	-0.3
nitrogen source	spermidine (N)	-0.9	-0.1	-0.0	-0.6	-0.2
nitrogen source	3-aminobutyric (N)	+0.0	-0.3	-0.3	-0.7	-0.1
nitrogen source	spermidine (N)	-0.3	+0.5	-0.4	-1.2	+0.2
nitrogen source	Putrescine (N)	-0.6	-0.1	-0.5	+0.0	-0.1
nitrogen source	Urea (N)	-0.6	+0.1	+0.1	-0.4	-0.1
nitrogen source	Nicotinamide (N)	-0.5	-0.7	+0.1	+0.2	+0.0
in planta	Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.5	-0.7	+0.1	+0.1	+0.1
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	-0.5	-0.3	-0.4	+0.2
stress	R2A with Tetracycline 0.002 mM	-0.5	-0.6	-0.1	+0.5	-0.1
nitrogen source	Orotic (N)	-1.0	+0.2	+0.2	+0.2	-0.3
carbon source	D-Saccharic potassium salt (C)	-0.4	-0.4	-0.3	+0.4	-0.1
carbon source	gluconate (C)	-0.6	-0.2	+0.0	+0.4	-0.1
nitrogen source	L-Phenylalanine (N)	-0.5	+0.6	-0.3	-0.3	+0.1
nitrogen source	nitrate (N)	+0.0	+0.3	+0.1	-0.8	-0.0
nitrogen source	DL-2-Aminobutyric (N)	+0.0	+0.7	+0.0	-0.3	-0.5
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.6	+0.1	-0.4	-0.4	+0.1
nitrogen source	6-aminocaproic (N)	+0.4	-0.5	+0.1	+0.2	-0.2
nitrogen source	L-Ornithine (N)	+0.2	+0.5	-0.3	-0.4	+0.1
nitrogen source	L-Valine (N)	+0.5	-0.4	-0.2	+0.3	-0.0
carbon source	D-Sorbitol (C)	-0.2	-0.1	-0.2	+0.8	-0.0
carbon source	D-Saccharic potassium salt (C)	+0.1	-0.3	+0.1	+0.8	-0.2
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.6	+0.1	+0.1	-0.4	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.6	-0.3	-0.1	+0.5	-0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	-0.2	-0.0	+0.7	+0.1
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.8	-0.0	-0.2	+0.4	-0.0
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+1.0	-0.0	-0.2	+0.1	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	+0.9	-0.1	+0.0	+0.3
no phage	P2L5	+0.5	+0.5	+0.4	+0.6	+0.2