Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu6119	Atu6120	Atu6121	Atu6122	Atu6123
carbon source	Rhamnogalacturonan - from potato (C)	-0.7	-0.3	-0.1	-0.2	-0.4
nitrogen source	spermidine (N)	-0.3	-0.3	+0.5	-0.4	-1.2
nitrogen source	Betaine (N)	-0.8	-0.2	-0.5	-0.1	-0.1
nitrogen source	D-Glucosamine Hydrochloride (N)	+0.1	-0.3	-0.8	+0.2	-0.7
nitrogen source	Putrescine (N)	-0.3	-0.6	-0.1	-0.5	+0.0
nitrogen source	3-aminobutyric (N)	-0.1	+0.0	-0.3	-0.3	-0.7
nitrogen source	Nicotinamide (N)	+0.5	-0.6	-0.2	-0.2	-1.0
nitrogen source	spermidine (N)	+0.2	-0.9	-0.1	-0.0	-0.6
nitrogen source	L-Methionine (N)	-0.5	-0.1	+0.2	-0.2	-0.5
in planta	Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.1	-0.5	-0.7	+0.1	+0.1
nitrogen source	Nicotinamide (N)	+0.1	-0.5	-0.7	+0.1	+0.2
carbon source	D-Saccharic potassium salt (C)	-0.2	-0.4	-0.4	-0.3	+0.4
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.4	+0.2	-0.5	-0.3	-0.4
stress	R2A with Tetracycline 0.002 mM	+0.1	-0.5	-0.6	-0.1	+0.5
nitrogen source	L-Phenylalanine (N)	+0.2	-0.5	+0.6	-0.3	-0.3
nitrogen source	L-Ornithine (N)	-0.4	+0.2	+0.5	-0.3	-0.4
nitrogen source	DL-2-Aminobutyric (N)	-0.6	+0.0	+0.7	+0.0	-0.3
carbon source	gluconate (C)	+0.3	-0.6	-0.2	+0.0	+0.4
nitrogen source	Orotic (N)	+0.3	-1.0	+0.2	+0.2	+0.2
carbon source	D-Saccharic potassium salt (C)	-0.7	+0.1	-0.3	+0.1	+0.8
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.0	+0.6	+0.1	-0.4	-0.4
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.7	-0.2	-0.4	+0.2	-0.2
nitrogen source	L-Aspartic Acid (N)	-0.4	-0.1	-0.3	+0.3	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3	+0.6	-0.3	-0.1	+0.5
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.4	+0.3	-0.2	-0.0	+0.7
carbon source	D-Sorbitol (C)	+0.1	-0.2	-0.1	-0.2	+0.8
carbon source	Melibiose (C)	+0.3	-0.4	-0.1	+0.1	+0.7
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.5	-0.3	+0.1	+0.4
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.7	-0.0	-0.2	+0.4	+0.3
no phage	P2L5	-0.2	+0.5	+0.5	+0.4	+0.6