Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu6106	Atu6107	Atu6108	Atu6109	Atu6110
carbon source	D-Saccharic potassium salt (C)	-1.3	-1.3	-1.0	-0.0	-0.3
phage	AgroPhage_E10	-2.7	+0.1	-0.7	+0.5	-0.0
carbon source	D-Sorbitol (C)	-0.1	-1.1	+0.2	-0.4	-0.5
nitrogen source	L-Valine (N)	-1.1	-0.5	-0.3	-0.1	+0.0
nitrogen source	L-pyroglutamic (N)	-0.1	-1.2	-0.3	-0.1	+0.1
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-1.1	-0.4	+0.0	+0.2	-0.2
carbon source	Dextrin from potato starch (C)	+0.4	-1.0	+0.4	-0.4	-0.5
carbon source	D-Saccharic potassium salt (C)	-1.6	-0.6	+0.3	+0.5	+0.3
nitrogen source	Carnitine Hydrochloride (N)	-0.9	+0.4	+0.0	-0.4	-0.1
nitrogen source	L-Glutamic (N)	-0.3	+0.2	-0.9	+0.2	-0.1
nitrogen source	Putrescine (N)	+1.1	-1.2	-0.5	-0.4	+0.1
nitrogen source	L-Phenylalanine (N)	+0.7	-1.2	+0.2	-0.4	-0.1
nitrogen source	Nicotinamide (N)	-1.1	+0.5	-0.3	+0.3	-0.1
nitrogen source	L-Phenylalanine (N)	-0.3	-0.7	-0.3	+0.4	+0.2
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.9	-0.4	+0.4	+0.2	+0.1
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.7	-0.6	+0.4	+0.5	+0.2
nitrogen source	5-Aminolevulinic (N)	+0.6	-0.3	-0.6	+0.4	-0.2
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-1.1	+0.5	+0.5	+0.0	+0.1
carbon source	Methyl alpha-D-glucopyranoside (C)	+0.9	-0.4	-0.3	-0.3	+0.1
nitrogen source	DL-2-Aminobutyric (N)	+0.5	+0.8	+0.2	-1.1	-0.2
nitrogen source	Nicotinamide (N)	+0.6	-0.1	-0.4	+0.5	-0.3
nitrogen source	L-Aspartic Acid (N)	+1.0	+0.3	+0.1	-0.9	-0.1
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.7	-0.4	-0.3	+0.4	+0.1
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.6	+0.1	-0.1	+0.8	+0.2
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	+0.5	+0.7	-0.5	+0.1
nitrogen source	L-Methionine (N)	+0.8	-0.2	-0.5	+0.3	+0.1
no phage	P1L5	+0.8	-0.4	+0.3	+0.2	-0.3
nitrogen source	spermidine (N)	+0.9	+0.3	-0.4	+0.1	+0.0
nitrogen source	Putrescine (N)	+0.8	-0.2	-0.2	+0.7	+0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.4	+1.1	+0.6	+0.1	+0.4