Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu6100	Atu6101	Atu6103	Atu6104	Atu6105
carbon source	2-Keto-D-gluconic hemicalcium salt (C)	-0.6	-0.2	-0.1	-0.5	-0.0
nitrogen source	Nicotinamide (N)	-0.4	-0.2	-0.2	-0.5	-0.1
carbon source	L-Galactose (C)	-0.4	-0.1	+0.0	-0.6	-0.2
carbon source	Dextrin from potato starch (C)	+0.4	-0.2	-0.3	-0.9	-0.1
carbon source	D-Mannose (C)	-0.5	-0.1	-0.1	-0.5	+0.1
carbon source	D-Saccharic potassium salt (C)	-0.3	-0.1	+0.4	-0.7	-0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.0	-0.0	-0.8	+0.1
carbon source	gluconate (C)	-0.5	-0.2	-0.2	+0.2	-0.2
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	-0.4	-0.0	+0.2	-0.7	+0.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.3	-0.1	-0.1	-0.6	-0.4
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days	-0.3	-0.0	+0.2	-0.7	+0.0
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	-0.0	-0.1	-0.6	+0.3
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.4	+0.1	-0.1	-0.3	+0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.6	+0.0	+0.2	-0.4	+0.2
lb_sorghum f72 f505	LB_Sorghum F72 F505	-0.4	+0.1	+0.3	-0.5	+0.0
nitrogen source	Putrescine (N)	-0.6	-0.2	+0.1	+0.0	+0.3
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.0	-0.1	+0.1	-0.6	+0.3
nitrogen source	L-Histidine (N)	+0.3	-0.1	-0.3	-0.3	+0.1
nophagecontrol	No phage control	-0.2	+0.0	+0.2	-0.5	+0.2
nitrogen source	L-Threonine (N)	+0.2	-0.2	-0.1	+0.3	-0.3
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.1	+0.4	+0.3	-0.1
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.1	+0.5	-0.2	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	-0.0	-0.0	+0.7	+0.2
phage	phage 100.3	+0.6	-0.0	+0.2	+0.3	+0.1
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.1	+0.3	-0.1	+0.5
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.2	+0.4	+0.4	+0.1
stress	R2A with G418 disolution 0.02 mM	+0.1	+0.1	+0.4	+0.5	+0.2
carbon source	methyl-beta-D-xylopyranoside (C)	+0.5	+0.1	+0.2	+0.2	+0.2
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.9	+0.3	+0.1	-0.2	+0.4
nitrogen source	DL-2-Aminobutyric (N)	-0.3	+0.1	-0.1	+1.0	+0.7