Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu6098	Atu6099	Atu6100	Atu6101	Atu6103
carbon source	2-Keto-D-gluconic hemicalcium salt (C)	N.D.	-0.3	-0.6	-0.2	-0.1
nitrogen source	D-Glucosamine Hydrochloride (N)	N.D.	-0.4	-0.4	-0.1	-0.3
nitrogen source	Ammonium chloride (N)	N.D.	-0.3	-0.5	-0.2	-0.1
nitrogen source	Hydantoin (N)	N.D.	-0.4	-0.4	-0.0	-0.2
nitrogen source	Nicotinamide (N)	N.D.	-0.2	-0.4	-0.2	-0.2
nitrogen source	5-Aminolevulinic (N)	N.D.	+0.1	-0.4	+0.0	-0.5
nitrogen source	DL-2-Aminobutyric (N)	N.D.	-0.5	-0.3	+0.1	-0.1
nitrogen source	Urea (N)	N.D.	+0.2	-0.1	-0.2	-0.6
carbon source	Dextrin from potato starch (C)	N.D.	-0.8	+0.1	+0.2	-0.0
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days	N.D.	-0.5	-0.4	+0.1	+0.2
phage	AgroPhage_D10	N.D.	-0.5	-0.2	-0.0	+0.2
nitrogen source	Putrescine (N)	N.D.	+0.2	-0.6	-0.2	+0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	N.D.	-0.1	-0.6	+0.0	+0.2
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	N.D.	+0.1	-0.7	-0.1	+0.2
carbon source	D-Saccharic potassium salt (C)	N.D.	-0.3	-0.3	-0.1	+0.4
carbon source	Dextrin from potato starch (C)	N.D.	-0.1	+0.4	-0.2	-0.3
nitrogen source	D-Glucosamine Hydrochloride (N)	N.D.	-0.3	+0.3	-0.1	+0.3
stress	R2A with Vancomycin 0.009 mM	N.D.	+0.4	+0.4	-0.1	-0.3
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	N.D.	+0.3	-0.3	+0.1	+0.4
	Atjh2	N.D.	-0.2	+0.2	+0.2	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	+0.7	-0.1	-0.0	+0.2
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	N.D.	+0.3	+0.3	-0.1	+0.4
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	N.D.	+0.4	+0.4	-0.0	+0.1
phage	phage 99.2	N.D.	+0.3	+0.5	-0.0	+0.2
phage	phage 100.3	N.D.	+0.2	+0.6	-0.0	+0.2
	Atjh14	N.D.	+0.2	+0.6	+0.2	+0.0
	No phage control	N.D.	+0.2	+0.7	-0.0	+0.2
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	N.D.	+0.4	+0.1	+0.2	+0.4
	Atjh2	N.D.	+0.2	+0.4	+0.3	+0.4
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	N.D.	+0.2	+0.9	+0.3	+0.1