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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu6097 and Atu6098 overlap by 4 nucleotides
Atu6098 and Atu6099 are separated by 380 nucleotides
Atu6099 and Atu6100 are separated by 11 nucleotides
Atu6100 and Atu6101 are separated by 128 nucleotides
Atu6097: Atu6097 - cell filamentation protein, at 117,878 to 118,474
Atu6097
Atu6098: Atu6098 - transcriptional regulator, HTH family, at 118,471 to 118,932
Atu6098
Atu6099: Atu6099 - conserved hypothetical protein, at 119,313 to 119,915
Atu6099
Atu6100: Atu6100 - conserved hypothetical protein, at 119,927 to 120,328
Atu6100
Atu6101: Atu6101 - helicase, SNF2 family, at 120,457 to 125,538
Atu6101
Group
Condition
Atu6097
Atu6098
Atu6099
Atu6100
Atu6101
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.1
-5.2
-0.1
-0.3
-0.0
in planta
Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.0
-5.0
-0.3
-0.2
-0.0
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.3
-5.2
-0.1
+0.2
-0.1
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.6
-4.8
-0.2
-0.0
+0.1
in planta
Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.1
-5.0
+0.0
-0.4
+0.0
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.1
-5.0
+0.1
-0.4
+0.1
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.1
-5.2
+0.1
-0.3
+0.0
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
-5.1
-0.4
-0.1
+0.0
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
-5.2
-0.0
-0.1
-0.1
in planta
Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.1
-5.2
+0.3
-0.2
+0.1
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
-4.6
+0.1
-0.7
-0.1
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.1
-4.9
+0.3
-0.3
-0.0
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.2
-5.1
+0.1
+0.2
+0.1
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.4
-5.1
+0.0
-0.3
+0.1
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.3
-4.7
-0.1
-0.4
+0.1
in planta
Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.1
-5.1
+0.1
-0.0
+0.1
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075
+0.2
-5.1
+0.1
+0.1
+0.0
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
-4.7
-0.1
-0.3
+0.2
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.0
-5.1
+0.2
+0.2
+0.1
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0
-0.2
-4.9
+0.3
+0.1
+0.1
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
-4.9
+0.2
-0.2
+0.1
in planta
Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.0
-5.1
+0.2
+0.3
+0.1
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
-5.1
+0.1
+0.3
+0.0
in planta
Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.3
-5.1
+0.1
+0.3
+0.0
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.2
-4.7
+0.4
+0.1
+0.2
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.3
-4.9
+0.3
+0.3
-0.1
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
-5.1
+0.4
+0.4
-0.0
in planta
Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
+0.4
-4.6
-0.2
+0.3
+0.1
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
-4.8
+0.1
+0.5
+0.1
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
-4.8
+0.2
+0.9
+0.3
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