Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu6090	Atu6091	Atu6092	Atu6093	Atu6094
carbon source	Dextrin from potato starch (C)	-0.3	-0.3	-0.3	-0.1	-0.4
nitrogen source	Hydantoin (N)	-0.2	-0.6	-0.4	-0.1	+0.0
carbon source	D-Maltose (C)	-0.2	-0.3	-0.4	-0.1	-0.2
carbon source	Cellohexaose (C)	-0.3	-0.2	-0.1	-0.1	-0.3
nitrogen source	5-Aminolevulinic (N)	-0.0	-0.4	-0.2	+0.1	-0.5
nitrogen source	spermidine (N)	-0.1	-0.3	+0.0	-0.1	-0.4
carbon source	L-Sorbose (C)	-0.2	-0.3	-0.0	-0.1	-0.3
nitrogen source	DL-2-Aminobutyric (N)	-0.2	-0.4	-0.2	-0.2	-0.0
carbon source	Ribitol (C)	-0.3	-0.1	-0.1	-0.2	-0.2
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.0	-0.3	-0.3	-0.1	-0.2
carbon source	Asolectin from soybean (C)	-0.1	-0.3	-0.1	-0.2	-0.1
carbon source	D-Saccharic potassium salt (C)	-0.2	+0.1	-0.5	-0.1	-0.1
carbon source	D-Sorbitol (C)	-0.1	-0.3	-0.3	+0.0	+0.1
nitrogen source	nitrate (N)	-0.3	-0.2	+0.1	+0.2	-0.3
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	-0.3	-0.5	+0.1	-0.0
nitrogen source	6-aminocaproic (N)	-0.2	+0.1	-0.1	+0.1	-0.5
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.3	-0.0	+0.2	-0.4
carbon source	Rhamnogalacturonan - from potato (C)	+0.1	-0.6	-0.0	+0.1	-0.1
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.3	+0.2	+0.2	-0.2
nitrogen source	L-Aspartic Acid (N)	+0.1	+0.2	+0.1	-0.3	-0.3
nitrogen source	Putrescine (N)	-0.2	-0.3	+0.3	-0.1	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.0	-0.4	+0.1	-0.0	+0.4
phage	AgroPhage_A07	+0.1	+0.2	-0.4	+0.1	+0.1
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	-0.3	+0.1	+0.0	+0.4
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.0	+0.1	+0.3	+0.2	-0.2
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.2	+0.5	+0.1	-0.0	+0.3
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	+0.1	+0.2	+0.3	-0.1	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.0	+0.1	+0.2	+0.0	+0.7
in planta	Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.3	+0.4	-0.0	+0.2	+0.2
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.4	+0.3	+0.2	+0.4	+0.6