Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu6088	Atu6089	Atu6090	Atu6091	Atu6092
carbon source	Dextrin from potato starch (C)	-0.5	-0.4	-0.3	-0.3	-0.3
nitrogen source	Hydantoin (N)	-0.3	-0.2	-0.2	-0.6	-0.4
carbon source	D-Maltose (C)	-0.2	-0.1	-0.2	-0.3	-0.4
carbon source	L-Galactose (C)	-0.2	-0.2	-0.2	-0.3	-0.2
carbon source	Rhamnogalacturonan - from potato (C)	-0.5	+0.1	+0.1	-0.6	-0.0
carbon source	D-Saccharic potassium salt (C)	-0.2	-0.1	-0.2	+0.1	-0.5
carbon source	D-Sorbitol (C)	+0.1	-0.1	-0.1	-0.3	-0.3
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.0	+0.2	-0.3	-0.5
carbon source	Cellohexaose (C)	-0.2	+0.1	-0.3	-0.2	-0.1
nitrogen source	Orotic (N)	-0.1	+0.2	-0.1	-0.5	-0.1
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.4	-0.3	-0.2	-0.4	-0.0
carbon source	Rhamnogalacturonan - from potato (C)	-0.2	+0.1	+0.1	-0.3	+0.1
stress	R2A with Tetracycline 0.002 mM	+0.3	-0.2	-0.1	-0.2	+0.2
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.2	-0.2	-0.3	+0.2
in planta	Bethi_Library_OD0.01	+0.4	-0.1	-0.1	+0.1	-0.2
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.5	+0.1	-0.3	-0.0
phage	AgroPhage_E04	+0.3	-0.1	-0.0	+0.2	-0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.2	+0.2	+0.4	-0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0	+0.4	+0.0	-0.2	+0.2	-0.1
nitrogen source	L-Ornithine (N)	+0.2	-0.1	+0.2	+0.3	-0.1
carbon source	Methyl alpha-D-glucopyranoside (C)	+0.3	-0.2	-0.1	+0.3	+0.2
	No phage control	+0.4	+0.4	+0.2	-0.1	-0.2
no phage	P3L5	+0.2	+0.2	-0.1	+0.2	+0.2
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	-0.0	+0.1	+0.5	-0.1
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days	+0.3	+0.2	-0.0	-0.1	+0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075	+0.6	+0.1	+0.1	+0.1	-0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.4	+0.2	+0.1	+0.2	+0.1
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.5	-0.3	+0.4	+0.3	+0.2
in planta	Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.3	+0.3	+0.3	+0.4	-0.0
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.5	+0.2	+0.0	+0.3	+0.2