Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu6081	Atu6082	Atu6083	Atu6084	Atu6085
carbon source	Dextrin from potato starch (C)	-0.7	N.D.	-0.2	+0.1	-0.1
nitrogen source	Urea (N)	-0.3	N.D.	-0.1	-0.1	-0.4
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.5	N.D.	-0.0	-0.2	-0.1
carbon source	D-Saccharic potassium salt (C)	-0.1	N.D.	-0.3	-0.4	+0.1
stress	R2A with m-arsenite 0.8 mM	-0.8	N.D.	+0.0	+0.1	-0.0
nitrogen source	Carnitine Hydrochloride (N)	-0.1	N.D.	-0.1	+0.1	-0.5
phage	AgroPhage_F03	+0.1	N.D.	-0.2	-0.2	-0.3
no phage	P1L4	-0.2	N.D.	+0.1	-0.1	-0.4
carbon source	D-Trehalose (C)	-0.4	N.D.	-0.2	+0.1	-0.1
nitrogen source	Putrescine (N)	-0.7	N.D.	+0.0	-0.1	+0.4
	No phage control	+0.2	N.D.	-0.1	-0.6	+0.1
nitrogen source	4-Aminobutyric (N)	-0.5	N.D.	+0.2	+0.1	-0.2
nitrogen source	nitrate (N)	-0.1	N.D.	+0.2	-0.4	+0.1
nitrogen source	DL-2-Aminobutyric (N)	-0.4	N.D.	+0.2	-0.4	+0.3
phage	AgroPhage_B07	+0.4	N.D.	-0.2	-0.1	-0.3
phage	AgroPhage_H04	+0.4	N.D.	-0.1	-0.1	-0.2
nophagecontrol	No phage control	+0.4	N.D.	+0.0	-0.2	-0.2
phage	phage 100.3	+0.3	N.D.	-0.2	+0.2	-0.0
nitrogen source	Orotic (N)	-0.6	N.D.	+0.2	+0.3	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.2	N.D.	-0.1	+0.1	+0.5
phage	AgroPhage_E04	+0.8	N.D.	+0.0	-0.1	-0.2
phage	AgroPhage_F10	+0.8	N.D.	-0.1	-0.2	+0.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4	N.D.	+0.2	-0.1	-0.0
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.6	N.D.	+0.2	+0.0	-0.1
phage	AgroPhage_D10	+0.5	N.D.	+0.1	+0.2	-0.0
	Atjh2	+0.4	N.D.	-0.0	+0.2	+0.3
phage	AgroPhage_D04	+0.9	N.D.	-0.0	-0.0	+0.1
phage	AgroPhage_E10	+1.1	N.D.	-0.0	+0.1	-0.2
	Atjh15	+0.7	N.D.	+0.3	+0.0	+0.2
	Atjh14	+1.2	N.D.	+0.2	+0.0	+0.0