Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu6076	Atu6077	Atu6078	Atu6079	Atu6080
nitrogen source	Putrescine (N)	-0.2	-0.2	+0.0	-0.3	-0.4
nitrogen source	L-Phenylalanine (N)	+0.0	+0.1	-0.2	-0.5	-0.3
nitrogen source	D-Glucosamine Hydrochloride (N)	-0.5	-0.1	-0.1	-0.1	-0.1
carbon source	gluconate (C)	-0.2	-0.1	-0.3	-0.1	+0.1
nitrogen source	DL-2-Aminobutyric (N)	+0.1	-0.3	-0.3	-0.2	+0.0
nitrogen source	L-Aspartic Acid (N)	+0.0	+0.1	-0.2	-0.1	-0.4
carbon source	D-Saccharic potassium salt (C)	-0.2	-0.2	+0.0	+0.2	-0.3
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	+0.2	-0.2	-0.2	-0.1
nitrogen source	Hydantoin (N)	-0.3	-0.3	+0.2	+0.0	+0.0
nitrogen source	Betaine (N)	+0.2	-0.2	-0.2	+0.1	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	+0.1	-0.1	+0.2	-0.4
nitrogen source	Nicotinamide (N)	+0.2	+0.0	+0.1	-0.2	-0.3
carbon source	acetate (C)	-0.1	-0.1	+0.1	+0.3	-0.3
stress	R2A with selenate 630 mM	+0.1	-0.1	-0.1	-0.3	+0.2
nitrogen source	L-Phenylalanine (N)	+0.0	-0.3	+0.2	-0.3	+0.3
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.5	+0.2	-0.1	+0.2	+0.1
carbon source	D-Saccharic potassium salt (C)	-0.2	+0.3	-0.3	-0.2	+0.4
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.1	+0.3	-0.4	+0.2
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.2	+0.1	+0.1	-0.4
nitrogen source	nitrate (N)	+0.1	-0.2	+0.2	-0.2	+0.2
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	-0.1	+0.2	-0.5	+0.4
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.2	-0.2	+0.1	+0.3	+0.3
phage	AgroPhage_D04	+0.1	+0.0	-0.2	+0.6	-0.1
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.1	+0.2	+0.2	+0.0
phage	phage 99.2	-0.2	+0.1	-0.0	+0.2	+0.4
phage	Phage 100.1 + bacteria	+0.2	+0.0	+0.2	+0.2	-0.2
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.5	+0.2	-0.0	+0.1	-0.1
no phage	P4L4	+0.3	+0.2	+0.0	-0.1	+0.3
carbon source	Methyl alpha-D-glucopyranoside (C)	+0.1	-0.0	+0.4	+0.2	+0.2
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.6	-0.1	+0.1	+0.2	+0.1