Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu6061	Atu6062	Atu6063	Atu6064	Atu6065
carbon source	Dextrin from potato starch (C)	-0.3	-0.5	-0.2	-0.3	+0.0
nitrogen source	Hydantoin (N)	+0.1	-0.4	-0.1	-0.5	-0.3
phage	AgroPhage_D10	-0.1	-0.5	-0.1	+0.0	-0.3
nitrogen source	Nicotinamide (N)	-0.2	-0.2	-0.0	+0.2	-0.6
nitrogen source	DL-2-Aminobutyric (N)	-0.3	+0.4	+0.1	-0.7	-0.2
nitrogen source	D-Glucosamine Hydrochloride (N)	+0.0	-0.4	-0.1	-0.6	+0.3
nitrogen source	L-Lysine (N)	-0.1	-0.2	-0.0	-0.5	+0.1
carbon source	Rhamnogalacturonan - from potato (C)	-0.1	-0.5	-0.1	-0.2	+0.2
phage	phage 100.2	+0.2	-0.4	+0.1	-0.2	-0.1
nitrogen source	spermidine (N)	-0.0	+0.2	-0.3	-0.6	+0.2
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.2	+0.4	-0.5	+0.0
nophagecontrol	No phage control	-0.1	-0.4	-0.0	-0.1	+0.4
nitrogen source	L-Histidine (N)	-0.2	+0.4	+0.1	-0.1	-0.2
carbon source	D-Sorbitol (C)	+0.1	+0.3	-0.2	-0.2	+0.3
nitrogen source	Putrescine (N)	-0.0	+0.5	-0.1	+0.2	-0.2
carbon source	D-Saccharic potassium salt (C)	-0.1	-0.1	-0.4	+0.7	+0.2
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.3	+0.1	-0.3	+0.2
nitrogen source	Betaine (N)	+0.1	-0.4	+0.1	+0.3	+0.2
carbon source	Rhamnogalacturonan - from potato (C)	+0.3	+0.4	-0.2	-0.0	-0.0
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.2	+0.1	-0.1	+0.3
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.0	+0.6	+0.1	+0.1	-0.2
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.2	+0.2	-0.3	+0.4
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.1	+0.1	-0.1	+0.2	+0.4
stress	R2A with Azlocillin 0.2 mM	+0.1	+0.3	+0.1	-0.1	+0.5
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.5	+0.1	-0.2	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	-0.1	+0.1	+0.2	+0.4
stress	R2A with G418 disolution 0.02 mM	+0.1	+0.3	-0.0	+0.4	+0.3
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.2	+0.0	+0.4	+0.1
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.2	+0.0	+0.2	+0.4
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	+0.1	+0.1	+0.2	+0.9