Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu6032	Atu6033	Atu6034	Atu6035	Atu6036
in planta	Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	+0.3	-0.3	-0.0	+0.1	-3.0
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	-0.4	-0.5	-0.1	-1.2
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	-0.1	-0.1	-0.1	-0.1	-2.3
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.0	+0.0	-0.0	-0.2	-2.1
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	+0.8	-0.2	-0.1	-2.4
phage	AgroPhage_F04	-0.5	-0.2	-0.1	+0.2	-1.5
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	-0.3	+0.2	-0.2	-1.9
stress	R2A with Strontium chloride 750 mM	+0.2	-0.3	+0.2	-0.1	-1.9
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.1	+0.1	+0.2	-1.8
stress	R2A with Chlorite 0.2 mM	+0.2	-0.0	+0.2	+0.1	-2.0
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	+0.1	+0.2	+0.1	-2.1
carbon source	Methyl alpha-D-glucopyranoside (C)	-0.1	+0.6	+0.0	+0.1	-2.0
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.4	+0.7	+0.1	-0.0	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.6	-0.3	+0.2	+0.5	-0.9
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	-1.0	-0.1	-0.3	+1.5
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.5	-0.2	+0.5	+1.3
nitrogen source	6-aminocaproic (N)	+0.5	+0.6	-0.4	-0.2	+1.0
carbon source	Dextrin from potato starch (C)	-0.8	+0.3	+0.1	+0.2	+1.7
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.6	+0.3	+0.5	-0.2	+1.6
nitrogen source	Putrescine (N)	-0.1	-0.3	-0.2	+0.1	+2.2
carbon source	Fumarate (C)	+0.2	+0.2	-0.3	-0.2	+1.8
nitrogen source	L-Leucine (N)	+0.4	-0.2	-0.1	+0.2	+1.5
phage	AgroPhage_E10	-0.2	+0.3	+0.1	-0.1	+1.8
carbon source	D-Saccharic potassium salt (C)	+0.1	-0.1	-0.1	-0.1	+2.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.0	+0.1	-0.1	-0.1	+2.1
nitrogen source	DL-2-Aminobutyric (N)	+0.5	+0.6	+0.5	-0.2	+0.6
nitrogen source	Putrescine (N)	+0.4	-0.4	+0.3	+0.3	+1.6
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.1	+0.1	-0.1	-0.1	+2.4
carbon source	Dextrin from potato starch (C)	-0.3	+0.8	+0.0	+0.1	+1.9
carbon source	D-Saccharic potassium salt (C)	+0.3	+0.0	+0.1	-0.0	+2.9