Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu6007	Atu6008	Atu6009	Atu6010	Atu6011
pH	R2A pH 5.5	-0.2	-0.4	-0.6	-0.2	-0.3
carbon source	2-6-dihydroxybenzoic (C)	-0.2	-0.1	-0.6	-0.2	-0.2
pH	R2A pH 5.5	-0.2	-0.3	-0.4	-0.2	-0.3
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.2	-0.1	-0.7	-0.2	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.0	+0.1	-1.3	-0.0	+0.0
carbon source	Fumarate (C)	-0.1	+0.1	-1.1	-0.0	-0.0
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.4	-0.5	-0.1	-0.2
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.1	-1.4	+0.2	+0.0
nitrogen source	Nicotinamide (N)	-0.0	-0.0	-1.0	+0.0	+0.1
nitrogen source	L-Methionine (N)	+0.1	+0.0	-1.2	+0.1	+0.2
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.1	-0.9	-0.0	+0.1
stress	R2A with G418 disolution 0.02 mM	-0.2	-0.5	+0.2	-0.1	-0.2
nitrogen source	Putrescine (N)	+0.1	-0.3	-0.6	+0.1	+0.1
carbon source	Dextrin from potato starch (C)	+0.2	-0.5	-0.4	+0.1	+0.0
nitrogen source	5-Aminolevulinic (N)	-0.0	+0.4	-1.2	+0.1	+0.0
nitrogen source	L-Lysine (N)	+0.1	+0.0	-0.8	+0.1	+0.2
nitrogen source	5-Aminovaleric (N)	+0.1	+0.4	-1.0	+0.1	+0.1
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.3	-0.7	-0.1	-0.0
stress	R2A with Kanamycin sulfate 0.02 mM	-0.1	-0.2	+0.5	-0.2	-0.1
nitrogen source	Ammonium chloride (N)	+0.1	+0.3	-0.9	+0.2	+0.0
nitrogen source	6-aminocaproic (N)	+0.1	+0.3	-0.6	-0.1	+0.1
nitrogen source	Carnitine Hydrochloride (N)	+0.1	+0.3	-0.5	-0.1	+0.2
phage	AgroPhage_E10	+0.2	-0.3	+0.4	+0.1	+0.2
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.2	+0.8	-0.1	+0.1
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.0	-0.1	+0.9	-0.1	+0.1
carbon source	D-Sorbitol (C)	+0.1	+0.0	+0.9	+0.1	-0.1
stress	R2A with Tetracycline 0.002 mM	+0.0	-0.1	+1.0	+0.2	-0.0
nitrogen source	L-Pipecolic Acid (N)	+0.2	+0.2	+0.6	+0.1	+0.1
carbon source	Cellohexaose (C)	+0.2	+0.2	+0.7	+0.0	+0.1
carbon source	Ribitol (C)	+0.4	+0.3	+1.1	+0.2	+0.3