Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu5526 and Atu5527 are separated by 22 nucleotidesAtu5527 and Atu5528 are separated by 739 nucleotidesAtu5528 and Atu5529 are separated by 431 nucleotidesAtu5529 and Atu5530 are separated by 12 nucleotides Atu5526: Atu5526 - monooxygenase, at 518,135 to 519,238 Atu5526 Atu5527: Atu5527 - NADH-dependent FMN reductase, at 519,261 to 519,863 Atu5527 Atu5528: Atu5528 - two component sensor kinase, at 520,603 to 522,531 Atu5528 Atu5529: Atu5529 - two component sensor kinase, at 522,963 to 524,114 Atu5529 Atu5530: Atu5530 - two component response regulator, at 524,127 to 524,735 Atu5530
Group Condition Atu5526 Atu5527 Atu5528 Atu5529 Atu5530
phage phage 100.2 -0.3 -0.5 -0.1 -0.4 -0.0
nitrogen source L-Ornithine (N) +0.1 -0.8 -0.2 -0.2 +0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.6 -0.1 -0.2 +0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.4 -0.5 +0.2 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.3 +0.1 -0.6 -0.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.1 -0.3 +0.2 -0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.2 -0.1 -0.3 -0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.6 +0.1 -0.2 -0.1
nitrogen source L-Histidine (N) -0.2 +0.2 +0.0 +0.1 -0.7
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.2 -0.0 +0.3 -1.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.4 -0.2 -0.4 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.4 +0.2 -0.3 +0.4
phage AgroPhage_F03 +0.2 -0.2 +0.1 -0.4 +0.3
phage phage 99.2 -0.3 +0.3 +0.2 -0.3 +0.2
nitrogen source Putrescine (N) -0.3 +0.4 +0.2 +0.1 -0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.6 +0.1 +0.0 -0.3
carbon source D-Saccharic potassium salt (C) +0.4 -0.5 -0.0 -0.2 +0.4
nitrogen source Betaine (N) -0.2 +0.6 +0.1 -0.2 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 +0.0 +0.4 -0.3
nitrogen source L-Phenylalanine (N) +0.2 -0.3 +0.2 -0.1 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 -0.1 +0.1 +0.4 -0.3
nitrogen source L-Valine (N) +0.0 +0.5 -0.2 -0.2 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +0.2 -0.0 +0.6 -0.3
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.2 +0.6 -0.0 +0.3 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.6 -0.1 +0.4 -0.1
carbon source D-Saccharic potassium salt (C) +0.3 +0.2 +0.4 -0.0 +0.3
carbon source m-Inositol (C) +0.3 +0.3 +0.1 +0.3 +0.1
stress R2A with Tetracycline 0.002 mM +0.3 +0.2 +0.2 +0.2 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +0.4 +0.3 +0.1 +0.2
nitrogen source DL-2-Aminobutyric (N) +0.5 +0.4 +0.3 +0.4 +0.1
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