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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu5495 and Atu5496 are separated by 237 nucleotides
Atu5496 and Atu5497 are separated by 264 nucleotides
Atu5497 and Atu5498 are separated by 127 nucleotides
Atu5498 and Atu5499 overlap by 4 nucleotides
Atu5495: Atu5495 - hydrolase, at 485,227 to 486,087
Atu5495
Atu5496: Atu5496 - TetR family transcriptional regulator, at 486,325 to 486,867
Atu5496
Atu5497: Atu5497 - hypothetical protein, at 487,132 to 488,121
Atu5497
Atu5498: Atu5498 - oxidoreductase with iron-sulfur subunit, at 488,249 to 488,782
Atu5498
Atu5499: Atu5499 - oxidoreductase, at 488,779 to 489,768
Atu5499
Group
Condition
Atu5495
Atu5496
Atu5497
Atu5498
Atu5499
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
-0.7
-0.8
-0.5
-0.2
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.0
-0.8
-0.3
-0.3
-0.1
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
-0.7
-0.2
-0.6
-0.1
stress
R2A with m-arsenite 0.8 mM
+0.1
-0.4
-0.8
-0.3
+0.1
in planta
Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
+0.2
-0.1
-0.2
-0.7
-0.4
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
-0.6
-0.4
-0.4
-0.1
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
-0.6
-0.3
-0.3
+0.1
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.0
-1.1
-0.1
+0.0
+0.2
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.0
-0.3
-0.1
-0.7
+0.4
in planta
Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.1
-0.9
+0.1
-0.1
+0.2
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
-0.5
+0.0
-0.4
+0.3
in planta
Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.2
-1.0
+0.3
+0.3
+0.2
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.4
-0.6
-0.1
-0.1
+0.2
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.1
-0.8
+0.1
+0.0
+0.3
in planta
Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.3
-0.5
+0.2
-0.0
+0.4
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
-0.5
+0.3
-0.4
+0.3
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.1
-0.6
+0.5
-0.3
+0.3
nitrogen source
2,6-diaminopimelic (N)
+0.1
-0.5
+0.5
-0.3
+0.1
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.2
-0.7
+0.4
+0.4
+0.1
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.4
-0.6
-0.2
+0.8
+0.2
phage
AgroPhage_C04
+0.5
+0.2
-0.4
+0.2
+0.1
in planta
Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
-0.1
-0.5
+0.4
+0.6
+0.2
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
-0.1
+0.6
-0.2
+0.3
carbon source
D-Saccharic potassium salt (C)
+0.1
-0.6
+0.6
+0.5
+0.5
nitrogen source
Putrescine (N)
+0.2
+0.2
+0.4
-0.2
+0.4
nitrogen source
DL-2-Aminobutyric (N)
-0.1
+0.1
+1.1
-0.2
+0.1
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.4
+0.1
+0.4
-0.2
+0.4
nitrogen source
Putrescine (N)
-0.1
+0.6
+0.0
+0.4
+0.4
nitrogen source
L-Valine (N)
+0.3
+0.3
+0.3
+0.5
-0.1
phage
AgroPhage_D10
+0.1
+0.0
+0.7
+0.2
+0.4
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