Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu5484	Atu5485	Atu5486	Atu5487	Atu5488
nitrogen source	5-Aminolevulinic (N)	-0.1	-2.6	+0.1	-0.3	-0.0
stress	Chloramphenicol 12.5 ug/mL	-0.3	-1.2	+0.1	-1.4	+0.0
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	-1.1	-0.5	-0.5	-0.1
nitrogen source	Orotic (N)	+0.3	-1.3	-0.3	-0.5	-0.1
phage	phage 99.2	-0.1	-0.9	-0.5	-0.3	+0.1
phage	AgroPhage_E10	+0.2	-0.9	-0.3	-0.2	-0.3
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	-1.2	+0.5	-0.4	-0.4
nitrogen source	6-aminocaproic (N)	+0.3	-1.1	-0.4	-0.2	+0.1
phage	AgroPhage_D10	-0.2	-1.1	-0.0	+0.7	-0.4
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.7	-0.7	-0.3	-0.3
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.7	-0.4	-0.4	-0.4	-0.1
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	-0.7	+0.3	+0.5	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	-0.7	+0.4	-0.4	+0.5
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.5	-0.7	-0.7	+0.4	+0.3
stress	Chloramphenicol 12.5 ug/mL	+0.6	+0.3	-0.8	-0.0	-0.3
phage	AgroPhage_F10	+0.1	+0.0	-1.1	+0.7	+0.1
nitrogen source	spermidine (N)	+0.0	+0.8	-0.7	-0.3	+0.1
lb_tobacco_leaf	LB_Tobacco_Leaf	-0.0	+0.9	-0.4	-0.3	-0.3
nitrogen source	L-Leucine (N)	+0.3	-0.7	+0.5	-0.2	+0.2
	No phage control	-0.3	+1.7	-0.8	-0.7	+0.4
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	+1.0	-0.2	-0.3	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.0	-0.8	+0.7	+0.4	+0.1
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.5	+0.4	-0.0	+0.5	-0.5
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.2	+1.0	-0.4	+0.2	+0.2
nitrogen source	DL-2-Aminobutyric (N)	+1.2	+0.9	-1.0	+0.0	+0.1
nitrogen source	L-Aspartic Acid (N)	+0.3	+1.0	+0.3	+0.5	-0.0
nitrogen source	L-Glutamic (N)	+0.1	+1.1	+0.7	+0.0	+0.2
nitrogen source	Carnitine Hydrochloride (N)	+0.1	+1.3	+0.7	+0.2	+0.0
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.5	+1.4	+0.3	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.2	+1.5	+0.4	+0.4	+0.3