Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu5477	Atu5478	Atu5479	Atu5480	Atu5481
nitrogen source	D-Lysine (N)	-0.2	-0.3	-0.3	-0.0	-0.2
phage	AgroPhage_D10	-0.1	-0.1	-0.3	-0.5	-0.0
carbon source	D-Galacturonic Acid (C)	-0.0	-0.2	-0.1	-0.6	+0.2
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.0	-0.1	-0.3	-0.4	+0.4
stress	R2A with Azlocillin 0.2 mM	+0.1	+0.0	+0.2	-0.3	-0.4
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.1	-0.4	-0.3	+0.1
r2a_control	R2A control	+0.2	+0.2	-0.0	-0.2	-0.3
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	-0.2	-0.1	-0.0	-0.3	+0.5
carbon source	Methyl alpha-D-glucopyranoside (C)	-0.0	-0.3	+0.2	-0.2	+0.4
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	+0.2	+0.2	-0.1	+0.2
nitrogen source	Orotic (N)	-0.3	-0.2	+0.1	+0.2	+0.3
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	+0.3	+0.3	-0.5	+0.2
nitrogen source	5-Aminolevulinic (N)	-0.2	-0.2	+0.1	+0.5	+0.1
nitrogen source	Betaine (N)	-0.0	-0.3	-0.1	+0.6	+0.2
carbon source	D-Saccharic potassium salt (C)	-0.3	+0.0	-0.3	+0.6	+0.4
in planta	Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	+0.0	-0.1	-0.3	+0.7
nitrogen source	Nicotinamide (N)	-0.3	+0.1	+0.3	+0.1	+0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.0	+0.1	+0.8	-0.1
phage	phage 99.2	-0.3	+0.1	-0.0	+0.7	-0.0
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.5	+0.2	-0.2	-0.1
nitrogen source	4-Aminobutyric (N)	-0.2	+0.2	+0.1	+0.3	+0.3
phage	phage 95.1	+0.0	-0.0	-0.1	+0.7	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	+0.1	+0.0	+0.0	+0.8
nitrogen source	L-Methionine (N)	+0.2	-0.1	+0.2	+0.4	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.0	+0.0	+0.0	+0.0	+1.0
carbon source	D-Sorbitol (C)	+0.1	-0.1	+0.4	+0.5	+0.1
no phage	P2L5	+0.4	+0.2	+0.0	+0.2	+0.2
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.2	+0.3	+0.1	+0.7	-0.0
nitrogen source	Hydantoin (N)	+0.1	+0.5	+0.1	+0.4	+0.3
nitrogen source	DL-2-Aminobutyric (N)	+0.4	+0.7	-0.4	+0.5	+0.1