Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu5471	Atu5473	Atu5474	Atu5475	Atu5476
carbon source	Dextrin from potato starch (C)	-0.5	-0.5	+0.2	-1.5	-0.2
nitrogen source	Urea (N)	-0.1	-0.3	+0.1	-1.7	-0.3
phage	phage 99.2	-0.3	-0.3	+0.0	-1.6	+0.1
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-1.3	+0.0	-0.5	-0.3	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.2	-0.4	-0.2	-1.0	-0.1
carbon source	acetate (C)	-0.1	-0.2	+0.2	-1.5	-0.2
stress	R2A with Tetracycline 0.002 mM	-0.3	+0.2	-0.1	-1.4	+0.0
nitrogen source	Carnitine Hydrochloride (N)	+0.2	+0.1	-0.2	-1.8	+0.0
lb	LB	+0.2	-0.6	+0.1	-1.0	-0.3
nitrogen source	L-Glutamic (N)	+0.4	-0.7	+0.1	-1.2	-0.1
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days	+0.2	-0.4	+0.3	-1.2	-0.3
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.0	+0.3	-0.5	-1.3	-0.0
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.1	-0.4	+0.4	-1.2	-0.2
nitrogen source	L-Methionine (N)	-0.5	-0.2	+0.2	-1.0	+0.1
nitrogen source	5-Aminolevulinic (N)	-0.1	+0.3	+0.0	-1.4	-0.2
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.5	-0.3	+0.2	-1.8	+0.0
nitrogen source	L-Alanine (N)	-0.2	-0.2	+0.4	-1.1	-0.1
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	+0.5	-0.2	+0.3	-1.0	-0.2
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.7	-0.1	-0.1	-1.1	-0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.5	-0.9	+0.2	-0.4	+0.0
nitrogen source	Putrescine (N)	+0.4	+0.5	-0.3	-0.8	-0.1
nitrogen source	L-Aspartic Acid (N)	+0.4	-0.2	+0.3	-0.9	+0.2
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.6	-0.3	-0.1	+1.0	-0.1
nitrogen source	L-Proline (N)	+0.8	+0.0	+0.2	-1.3	+0.2
phage	AgroPhage_E10	+0.7	-1.2	+0.4	+0.4	-0.1
lb_cucumber_cotlyden	LB_cucumber_cotlyden	+0.4	-0.3	+0.3	+0.9	+0.1
nitrogen source	spermidine (N)	+0.6	-0.2	-0.0	+1.1	+0.1
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.2	+0.1	+1.2	-0.2
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	+0.7	-0.2	+0.2	+0.9	-0.0
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.9	-0.3	+0.0	+1.2	+0.0