Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu5445	Atu5446	Atu5447	Atu5448	Atu5449
nitrogen source	Urea (N)	-0.1	-0.1	-0.6	-0.4	-0.5
nitrogen source	spermidine (N)	-0.5	-0.4	-0.0	-0.2	-0.5
nitrogen source	3-aminobutyric (N)	+0.0	-0.2	-0.3	+0.0	-1.1
	No phage control	-0.2	-0.2	-0.6	-0.6	+0.1
phage	phage 99.2	-0.1	-0.2	-0.3	-0.8	-0.1
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.1	-0.1	-1.4	+0.1
nitrogen source	6-aminocaproic (N)	-0.0	+0.1	-0.1	-0.3	-1.0
nitrogen source	L-Leucine (N)	-0.1	+0.1	-0.1	-0.6	-0.5
stress	R2A with Chromium(III) Chloride Hexahydrate 0.02 mM	-0.1	+0.1	-0.2	-0.2	-0.7
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.4	+0.1	-0.7	-0.4
nitrogen source	nitrate (N)	-0.3	+0.1	-0.3	-0.5	-0.1
no phage	P4L5	-0.1	-0.2	-0.3	-0.7	+0.4
r2a_control	R2A control	+0.2	-0.4	-0.3	-0.1	-0.4
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.4	-0.1	-0.1	-0.7	-0.3
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.6	-0.1	+0.1	-1.1	-0.2
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.4	-0.2	-0.4	-0.4
phage	Phage 99.2 + bacteria	+0.2	-0.1	+0.4	-0.3	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.0	-0.2	-0.3	-0.2	+0.6
nitrogen source	5-Aminolevulinic (N)	+0.1	+0.1	-0.3	-0.5	+0.7
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	-0.3	+0.3	-0.5	+0.6
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.3	+0.3	+0.8	-0.0
carbon source	D-Saccharic potassium salt (C)	+0.2	+0.2	+0.1	+0.4	-0.4
nitrogen source	DL-2-Aminobutyric (N)	-0.2	-0.1	+0.6	+0.9	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.0	+0.5	+0.3	-0.5	+0.3
carbon source	D-Sorbitol (C)	-0.3	+0.1	+0.2	+0.4	+0.3
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.5	-0.1	-0.1	+0.7	-0.3
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.5	-0.0	-0.3	+0.1	+0.6
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.0	+0.1	-0.1	+0.7	+0.5
	Atjh14	+0.4	-0.1	+0.1	+1.1	-0.3
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.5	-0.1	+0.7	+0.3