Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu5427	Atu5428	Atu5429	Atu5430	Atu5431
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.8	+0.3	-0.7	-4.0	+0.8
r2a_control	R2A control	-0.4	-0.0	+0.4	-4.1	-0.1
nitrogen source	spermidine (N)	-0.2	-0.2	-0.7	-2.9	-0.3
nitrogen source	L-Asparagine (N)	-0.3	-0.2	-0.2	-3.3	-0.0
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.2	+0.2	-4.3	+0.1
stress	R2A with Gallium(III) chloride 0.02 mM	+0.2	+0.0	-0.0	-4.4	+0.2
nitrogen source	NAG (N)	-0.0	-0.1	-0.2	-3.5	-0.1
stress	R2A with nitrate 375 mM	-0.5	-0.1	-0.0	-3.1	-0.1
nitrogen source	L-Arginine (N)	-0.1	-0.1	-0.1	-3.6	+0.2
stress	R2A with Hydrogen peroxide 0.1 mM	-0.0	+0.3	-0.3	-3.6	-0.2
nitrogen source	L-Leucine (N)	-0.2	+0.2	-0.3	-3.1	-0.1
carbon source	Asolectin from soybean (C)	-0.5	-0.2	-0.1	-2.8	-0.0
nitrogen source	D-Glucosamine Hydrochloride (N)	+0.2	-0.1	-0.3	-3.2	+0.1
carbon source	Dextrin from potato starch (C)	-0.6	-0.1	-0.9	-2.1	+0.4
phage	AgroPhage_E04	-0.3	+0.3	-0.3	-3.1	+0.2
nitrogen source	Urea (N)	-0.2	-0.1	-0.2	-2.9	+0.3
nitrogen source	5-Aminovaleric (N)	-0.1	-0.2	+0.0	-3.1	+0.3
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.5	+0.1	+0.4	-2.5	-0.4
nitrogen source	L-Valine (N)	+0.3	+0.2	-0.7	-2.6	+0.3
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.7	-0.1	-0.3	-2.7	+0.1
nitrogen source	DL-2-Aminobutyric (N)	+0.5	-0.1	-1.0	-1.9	+0.4
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.0	-0.1	+0.8	-2.9	+0.1
phage	AgroPhage_C04	+0.9	-0.3	-0.1	-2.6	+0.4
phage	AgroPhage_A05	+0.5	+0.4	+0.0	-2.3	+0.3
r2a control	R2A control	+0.5	+0.3	+0.5	-2.2	+0.0
stress	R2A with Chloride 800 mM	+2.0	-0.1	-0.1	-1.2	-0.1
stress	Chloramphenicol 12.5 ug/mL	+1.6	+0.2	-0.4	+1.3	-0.2
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.3	-0.2	+2.5	+0.5
stress	R2A with Vancomycin 0.009 mM	-0.4	+0.0	+0.5	+2.7	-0.1
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+1.2	-0.2	+0.4	+2.2	+0.3