Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu5412 and Atu5413 overlap by 8 nucleotidesAtu5413 and Atu5414 are separated by 31 nucleotidesAtu5414 and Atu5415 overlap by 32 nucleotidesAtu5415 and Atu5418 are separated by 1020 nucleotides Atu5412: Atu5412 - ABC transporter membrane spanning protein, at 407,482 to 408,309 Atu5412 Atu5413: Atu5413 - ABC transporter membrane spanning protein, at 408,302 to 409,123 Atu5413 Atu5414: Atu5414 - Xaa-Pro dipeptidase, at 409,155 to 410,579 Atu5414 Atu5415: Atu5415 - hypothetical protein, at 410,548 to 411,255 Atu5415 Atu5418: Atu5418 - opine/octopine dehydrogenase, at 412,276 to 413,358 Atu5418
Group Condition Atu5412 Atu5413 Atu5414 Atu5415 Atu5418
nitrogen source L-Glutamic (N) -0.1 -0.6 -0.3 -0.3 -0.0
carbon source Rhamnogalacturonan - from potato (C) -0.0 -0.5 -0.2 -0.2 -0.3
phage AgroPhage_D04 -0.2 -0.6 +0.0 -0.3 -0.2
nitrogen source 6-aminocaproic (N) +0.1 -0.3 -0.6 -0.3 -0.1
nitrogen source 5-Aminolevulinic (N) -0.0 -0.2 +0.2 -0.8 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.4 +0.1 -0.3 -0.2
nitrogen source Ammonium chloride (N) -0.4 -0.0 -0.4 +0.3 -0.2
carbon source m-Inositol (C) -0.3 -0.2 -0.2 +0.3 -0.2
nitrogen source L-Valine (N) +0.1 +0.1 +0.1 -0.7 -0.1
nitrogen source Putrescine (N) +0.3 -0.5 -0.2 -0.1 +0.1
stress R2A with Chlorite 0.2 mM -0.1 +0.1 +0.2 -0.4 -0.3
carbon source D-Saccharic potassium salt (C) -0.1 -0.3 +0.3 -0.5 +0.3
nitrogen source L-Ornithine (N) +0.2 +0.2 -0.0 -0.5 -0.2
carbon source D-Saccharic potassium salt (C) -0.5 +0.6 +0.2 -0.2 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -0.0 -0.4 +0.3 +0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.4 -0.1 +0.5 -0.0
phage AgroPhage_A07 +0.0 +0.6 -0.2 +0.2 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.1 +0.4 +0.5 +0.1
stress R2A with chromate 0.1 mM -0.1 +0.4 +0.2 +0.3 -0.0
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.3 -0.2 +0.4 +0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.5 -0.2 +0.6 -0.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.5 +0.1 -0.0 +0.2
phage AgroPhage_F10 +0.2 +0.6 -0.0 +0.4 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.2 +0.3 +0.4 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.4 +0.2 -0.3 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.3 +0.3 +0.3 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.5 -0.2 +0.6 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.0 +0.1 +0.6 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.4 +0.6 +0.2 +0.2
nitrogen source DL-2-Aminobutyric (N) +0.2 +0.7 +0.6 +0.6 -0.1
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