Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1003 experiments or choose conditions or try the comparative fitness browser

500 ntAtu5401 and Atu5402 are separated by 17 nucleotidesAtu5402 and Atu5403 are separated by 195 nucleotidesAtu5403 and Atu5404 are separated by 302 nucleotidesAtu5404 and Atu5406 are separated by 1430 nucleotides Atu5401: Atu5401 - ABC transporter membrane spanning protein (sugar), at 395,035 to 395,868 Atu5401 Atu5402: Atu5402 - ABC transporter membrane spanning protein (sugar), at 395,886 to 396,779 Atu5402 Atu5403: Atu5403 - ABC transporter substrate binding protein (sugar), at 396,975 to 398,306 Atu5403 Atu5404: Atu5404 - transcriptional regulator, at 398,609 to 399,316 Atu5404 Atu5406: Atu5406 - GntR family transcriptional regulator, at 400,747 to 401,496 Atu5406
Group Condition Atu5401 Atu5402 Atu5403 Atu5404 Atu5406
nitrogen source Choline chloride (N) N.D. N.D. N.D. N.D. -0.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -0.5
nitrogen source L-Ornithine (N) N.D. N.D. N.D. N.D. -0.5
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. N.D. -0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -0.4
nitrogen source 5-Aminovaleric (N) N.D. N.D. N.D. N.D. -0.4
nitrogen source Orotic (N) N.D. N.D. N.D. N.D. -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -0.4
nitrogen source L-Glutamic (N) N.D. N.D. N.D. N.D. -0.4
nitrogen source Choline chloride (N) N.D. N.D. N.D. N.D. -0.4
phage Phage 95.1 + bacteria N.D. N.D. N.D. N.D. -0.4
nitrogen source 2,6-diaminopimelic (N) N.D. N.D. N.D. N.D. -0.4
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. N.D. -0.4
phage Phage 95.3 + bacteria N.D. N.D. N.D. N.D. -0.4
nitrogen source D-Glucosamine Hydrochloride (N) N.D. N.D. N.D. N.D. -0.4
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. N.D. -0.4
nitrogen source 6-aminocaproic (N) N.D. N.D. N.D. N.D. -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. N.D. N.D. -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -0.3
phage Phage 97.3 + bacteria N.D. N.D. N.D. N.D. -0.3
stress R2A with Phosphomycin 50 mM N.D. N.D. N.D. N.D. -0.3
phage AgroPhage_C10 N.D. N.D. N.D. N.D. -0.3
nitrogen source 6-aminocaproic (N) N.D. N.D. N.D. N.D. -0.3
nitrogen source spermidine (N) N.D. N.D. N.D. N.D. -0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -0.3
stress R2A with Lithium chloride 900 mM N.D. N.D. N.D. N.D. +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. N.D. +0.4
carbon source D-Saccharic potassium salt (C) N.D. N.D. N.D. N.D. +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. N.D. N.D. +0.7
remove
Atu5401
plot		 remove
Atu5402
plot		 remove
Atu5403		 remove
Atu5404
plot		 remove
Atu5406
plot