Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu5189	Atu5190	Atu5191	Atu5192	Atu5193
carbon source	D-Sorbitol (C)	-0.5	-0.4	-0.0	-0.4	-0.2
phage	AgroPhage_F03	-0.4	-0.3	-0.2	-0.1	-0.3
carbon source	D-Saccharic potassium salt (C)	-0.3	+0.0	-0.5	-0.4	+0.1
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	-0.5	+0.2	-0.2	-0.1
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days	-0.5	+0.1	-0.2	-0.2	-0.1
	Atjh14	-0.2	-0.7	-0.4	+0.4	-0.1
carbon source	Dextrin from potato starch (C)	-0.2	-0.3	-0.2	+0.1	-0.3
stress	R2A with Tetracycline 0.002 mM	+0.1	-0.4	-0.2	+0.1	-0.4
nitrogen source	nitrate (N)	-0.3	-0.4	-0.3	+0.1	+0.1
carbon source	Sucrose (C)	-0.2	-0.4	-0.2	+0.2	-0.1
phage	AgroPhage_C10	+0.3	-0.5	-0.2	-0.0	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.4	-0.3	-0.3	-0.2	-0.0
nitrogen source	Putrescine (N)	-0.3	-0.3	-0.3	+0.4	+0.2
carbon source	Cellohexaose (C)	-0.2	-0.3	-0.2	+0.4	-0.0
stress	Chloramphenicol 12.5 ug/mL	-0.3	-0.3	+0.3	+0.2	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2	+0.6	-0.0	-0.1	-0.2
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.5	+0.1	+0.1	+0.3	+0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.4	+0.6	+0.2	-0.3	+0.0
	No phage control	+0.4	-0.4	+0.3	+0.0	-0.1
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	+0.1	+0.1	+0.6	-0.2
phage	AgroPhage_C04	+0.1	+0.4	-0.2	+0.0	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.0	+0.5	+0.3	+0.1	-0.1
stress	R2A with Kanamycin sulfate 0.02 mM	+0.3	+0.3	+0.2	+0.4	-0.2
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	+0.1	+0.4	+0.3	+0.3	+0.0
stress	Chloramphenicol 12.5 ug/mL	+0.2	+0.2	+0.3	+0.3	+0.2
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.0	-0.0	+0.5	+0.6	+0.0
stress	R2A with Neomycin 0.002 mM	+0.5	+0.1	+0.2	+0.3	+0.1
stress	R2A with bromate 5 mM	+0.3	+0.4	+0.2	+0.2	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.1	+0.7	+0.1	+0.4	+0.2
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.3	+0.3	+0.7	+0.1