Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu5183	Atu5184	Atu5185	Atu5186	Atu5187
nitrogen source	L-Methionine (N)	-0.5	-0.3	-0.1	-1.0	-0.4
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.4	-0.2	-0.3	-0.9	-0.0
nitrogen source	5-Aminolevulinic (N)	-0.7	-0.5	+0.1	-0.5	-0.2
nitrogen source	6-aminocaproic (N)	-0.5	+0.2	-0.1	-1.6	+0.2
nitrogen source	Ethanolamine (N)	+0.2	-0.0	-0.3	-0.8	-0.5
nitrogen source	Ammonium chloride (N)	+0.2	-0.2	-0.3	-0.7	-0.2
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.2	+0.3	-1.0	-0.2
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.0	-0.3	-0.3	-0.8	+0.3
nitrogen source	L-Glutamic (N)	-0.4	+0.1	+0.3	-1.0	-0.1
nitrogen source	DL-2-Aminobutyric (N)	-0.6	+0.3	+0.2	-0.2	-0.7
nitrogen source	Orotic (N)	+0.3	-0.5	+0.2	-0.9	+0.0
phage	AgroPhage_E10	-1.2	-0.0	+0.4	+0.1	+0.0
phage	AgroPhage_H04	-0.8	-0.2	-0.3	+0.4	+0.1
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	-0.2	-0.3	+0.7	-0.5
carbon source	Methyl alpha-D-glucopyranoside (C)	+0.0	+0.4	-0.2	-0.9	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2	+0.3	+0.0	-0.8	+0.4
nitrogen source	Urea (N)	+0.5	-0.3	+0.2	-0.8	+0.1
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	-0.1	+0.0	+0.5	-0.7
nitrogen source	Nicotinamide (N)	+0.3	+0.4	-0.3	-0.6	+0.1
stress	R2A with Chlorate 400 mM	-0.6	+0.3	+0.3	+0.4	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4	+0.4	+0.0	+0.7	-0.4
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.2	-0.1	+0.8	+0.5
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.2	-0.1	-0.1	+1.6	-0.2
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	-0.2	+0.2	+1.5	-0.1
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.2	-0.2	+1.1	+0.1
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+1.3	+0.0	+0.1	+0.5	-0.5
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.2	-0.2	+1.4	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.2	+0.0	+0.2	+1.5	+0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.7	-0.5	+0.1	+1.8	+0.0
no phage	P2L5	-0.2	-0.3	+0.0	+3.0	-0.1