Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu8203	Atu5175	Atu5176	Atu5177	Atu5178
carbon source	D-Sorbitol (C)	-1.8	-0.2	-0.0	-0.1	-0.2
nitrogen source	Orotic (N)	-1.3	-0.5	-0.3	+0.0	-0.2
phage	AgroPhage_C10	-0.9	-0.2	+0.0	-0.3	-0.3
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.7	+0.1	-0.4	-0.2	-0.3
nitrogen source	4-Aminobutyric (N)	-1.2	-0.3	+0.1	+0.1	-0.1
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.6	-0.3	-0.2	-0.1	-0.2
nitrogen source	D-Glucosamine Hydrochloride (N)	-1.4	+0.3	-0.0	+0.0	-0.0
nitrogen source	L-Methionine (N)	-1.2	+0.3	-0.2	+0.0	+0.2
nitrogen source	6-aminocaproic (N)	-0.7	+0.1	-0.0	+0.1	-0.4
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.6	-0.4	-0.2	+0.1	+0.1
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.8	+0.2	-0.2	-0.0	-0.1
nitrogen source	L-Threonine (N)	-0.8	+0.2	-0.1	+0.1	+0.1
nitrogen source	L-Arginine (N)	-0.9	+0.2	+0.1	+0.0	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3	-0.4	+0.2	-0.1	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.4	-0.4	+0.3	+0.3	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5	-0.0	+0.4	-0.2	+0.3
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.5	-0.3	-0.2	+0.2
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.7	-0.2	-0.3	+0.2	-0.1
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	+0.4	+0.2	+0.2	-0.1
stress	R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM	+0.6	-0.4	+0.1	+0.0	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	-0.3	+0.7	+0.1	+0.2
stress	R2A with Vancomycin 0.009 mM	+0.9	-0.2	+0.2	-0.1	-0.1
stress	R2A with m-arsenite 0.8 mM	+0.8	-0.3	+0.3	+0.1	-0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.5	-0.2	+0.0	+0.4	+0.0
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.9	-0.2	+0.2	-0.0	+0.1
phage	AgroPhage_E04	+0.7	-0.2	+0.3	-0.1	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.1	-0.1	+0.7	+0.3	+0.2
carbon source	2-Keto-D-gluconic hemicalcium salt (C)	+1.0	+0.4	+0.0	-0.1	-0.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.9	+0.2	+0.3	+0.1	+0.0
nitrogen source	DL-2-Aminobutyric (N)	+1.0	+0.9	+0.0	+0.1	-0.0