Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu5162 and Atu5163 overlap by 4 nucleotidesAtu5163 and Atu5164 are separated by 2 nucleotidesAtu5164 and Atu5165 are separated by 100 nucleotidesAtu5165 and Atu5166 overlap by 1 nucleotides Atu5162: Atu5162 - type IV secretion protein AvhB1, at 160,508 to 161,194 Atu5162 Atu5163: Atu5163 - type IV secretion protein AvhB2, at 161,191 to 161,490 Atu5163 Atu5164: Atu5164 - type IV secretion protein AvhB3, at 161,493 to 161,834 Atu5164 Atu5165: Atu5165 - type IV secretion protein AvhB4, at 161,935 to 164,208 Atu5165 Atu5166: Atu5166 - type IV secretion protein AvhB5, at 164,208 to 164,906 Atu5166
Group Condition Atu5162 Atu5163 Atu5164 Atu5165 Atu5166
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -1.1 -2.0 -0.3 -0.6
phage AgroPhage_D04 -0.2 -1.1 -2.7 -0.2 -0.1
nophagecontrol No phage control -0.4 -0.3 -3.1 -0.1 -0.1
nitrogen source 5-Aminolevulinic (N) +0.1 -1.8 -2.2 -0.2 +0.4
nitrogen source D-Glucosamine Hydrochloride (N) +0.2 -0.7 -2.5 +0.1 -0.8
nitrogen source 6-aminocaproic (N) -0.2 -0.9 -1.9 -0.1 -0.4
nitrogen source 5-Aminovaleric (N) -0.3 +0.0 -2.8 -0.3 -0.2
nitrogen source L-Arginine (N) +0.1 -0.3 -3.4 -0.1 +0.2
nophagecontrol No phage control -0.1 -0.8 -1.3 -0.4 -0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.0 -2.8 -0.1 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -1.0 -2.3 +0.4 -0.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -1.8 -0.8 +0.3 -0.7
no phage P5L5 -0.0 -0.2 -2.1 -0.0 -0.4
nitrogen source L-Ornithine (N) -0.6 -2.3 +0.7 -0.1 +0.0
carbon source Ribitol (C) +0.2 +0.3 -2.1 +0.1 -0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.7 -3.3 +0.4 +0.2
nitrogen source D-Glucosamine Hydrochloride (N) -0.3 +0.9 -1.4 +0.1 -0.7
stress R2A with Phosphomycin 50 mM +0.1 +1.0 -2.2 -0.0 -0.2
carbon source L-Sorbose (C) +0.5 +0.4 -1.9 +0.0 +0.0
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.1 -2.0 +0.2 +0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.6 -1.6 +0.1 +0.4
nitrogen source DL-2-Aminobutyric (N) +0.2 +0.6 -1.5 +0.9 -0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.8 -2.2 +0.4 +1.3
phage AgroPhage_E04 -0.2 -0.6 +1.5 +0.1 +0.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.5 +2.2 +0.3 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 +1.0 -0.5 +0.7 +0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.2 +2.0 +0.5 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +0.3 +1.3 +0.3 +0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.3 +0.2 +0.3 +0.3 +1.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.1 +1.3 +0.7 +0.4 +0.9
remove
Atu5162
plot		 remove
Atu5163
plot		 remove
Atu5164		 remove
Atu5165
plot		 remove
Atu5166
plot