Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu5157 and Atu5158 are separated by 178 nucleotidesAtu5158 and Atu5159 are separated by 334 nucleotidesAtu5159 and Atu5160 are separated by 360 nucleotidesAtu5160 and Atu5161 are separated by 93 nucleotides Atu5157: Atu5157 - hypothetical protein, at 157,558 to 157,887 Atu5157 Atu5158: Atu5158 - hypothetical protein, at 158,066 to 158,410 Atu5158 Atu5159: Atu5159 - hypothetical protein, at 158,745 to 159,149 Atu5159 Atu5160: Atu5160 - transcriptional regulator protein, at 159,510 to 159,872 Atu5160 Atu5161: Atu5161 - hypothetical protein, at 159,966 to 160,505 Atu5161
Group Condition Atu5157 Atu5158 Atu5159 Atu5160 Atu5161
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.1 -0.5 -1.2 -1.3 +0.5
nitrogen source 5-Aminolevulinic (N) -1.7 -0.1 +0.1 -1.1 -0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 +0.0 -0.8 -1.9 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.3 -0.1 -2.6 +0.0
stress R2A with Vancomycin 0.009 mM -0.7 +0.1 -0.1 -2.1 +0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.1 -0.0 -0.1 -1.4 +0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.1 -1.0 -1.4 -0.2
no phage P2L5 +0.1 -0.5 -0.3 -1.2 -0.4
stress R2A with Vancomycin 0.009 mM -0.3 +0.1 -0.1 -2.0 +0.1
phage AgroPhage_E04 -1.0 +0.2 -0.0 -0.6 -0.6
carbon source D-Saccharic potassium salt (C) -1.2 -0.9 -0.1 +0.3 -0.0
nophagecontrol No phage control +0.4 -0.3 -0.7 -1.1 -0.2
phage phage 95.1 -0.4 -0.4 +0.5 -1.4 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 +0.2 +0.4 -1.5 -0.1
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X +0.2 +0.5 +0.2 -1.5 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.0 -0.4 +0.3 -2.0 +0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.3 +0.6 -1.3 +0.3
nitrogen source Putrescine (N) +0.2 -1.7 +0.4 +0.7 -0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 -0.5 -0.3 -0.8 +0.4
phage AgroPhage_H04 +0.7 -0.0 +0.3 -1.1 -0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 +0.5 +0.3 -0.5 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.2 +0.4 +0.9 -2.7 -0.1
carbon source D-Saccharic potassium salt (C) -0.9 -0.1 -0.3 +0.4 +0.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.4 +0.1 -1.9 +0.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.7 +0.7 -1.6 -0.0
phage AgroPhage_C04 +0.5 +0.6 +0.4 -1.0 -0.6
nitrogen source L-Isoleucine (N) +0.3 -1.2 +0.1 +0.9 -0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.9 -0.5 -0.4 +0.5
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.9 -0.3 -0.3 -1.0 +0.6
nitrogen source spermidine (N) -0.6 +0.1 +0.9 +0.9 +0.4
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