Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu5144 and Atu5145 are separated by 69 nucleotidesAtu5145 and Atu5146 are separated by 39 nucleotidesAtu5146 and Atu5147 are separated by 61 nucleotidesAtu5147 and Atu5148 are separated by 83 nucleotides Atu5144: Atu5144 - putative peptidase, at 150,245 to 151,000 Atu5144 Atu5145: Atu5145 - acetyltransferase, at 151,070 to 151,528 Atu5145 Atu5146: Atu5146 - hypothetical protein, at 151,568 to 151,765 Atu5146 Atu5147: Atu5147 - Mg(2+) transport ATPase, at 151,827 to 152,411 Atu5147 Atu5148: Atu5148 - hypothetical protein, at 152,495 to 152,899 Atu5148
Group Condition Atu5144 Atu5145 Atu5146 Atu5147 Atu5148
nitrogen source L-Valine (N) -0.5 -0.8 -4.5 +0.4 +0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -1.5 -1.2 -0.3 -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -1.3 -1.4 -0.6 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.0 -0.5 -0.9 -0.5 -0.5
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 -0.8 -1.0 +0.3 -0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.0 -2.1 -0.0 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -0.2 -0.4 -1.0 -0.6 -0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.5 -0.4 -0.4 -0.6
nitrogen source L-Glutamic (N) +0.2 -0.1 -1.7 +0.0 -0.8
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.7 -1.0 -0.3 +0.1
carbon source Dextrin from potato starch (C) +0.1 +0.1 -2.3 +0.2 -0.1
nitrogen source L-Ornithine (N) -0.1 -1.1 -1.1 -0.3 +0.6
nitrogen source nitrate (N) +0.3 -0.7 -0.7 -0.4 -0.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -1.2 -0.4 +0.7 -0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.6 -0.5 -0.5 -0.5
stress R2A with cyanide 2.5 mM -0.3 -0.3 -1.1 -0.3 +0.6
phage AgroPhage_E10 +0.7 -0.1 -1.8 +0.6 -0.6
nitrogen source L-Methionine (N) +0.7 -1.2 -1.1 +0.1 +0.3
nitrogen source 6-aminocaproic (N) +0.4 -0.8 +1.1 -0.4 -0.8
nophagecontrol No phage control +0.8 -1.4 -0.3 +0.3 +0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +2.0 -2.9 +0.4 +0.4
nitrogen source L-Isoleucine (N) +0.3 -0.7 +1.2 -0.6 -0.3
nitrogen source L-Phenylalanine (N) -0.3 -0.5 +1.3 +0.0 -0.3
phage AgroPhage_D10 +0.1 -1.1 +0.4 +0.6 +0.3
phage phage 99.2 -0.3 +0.7 +0.6 -0.5 +0.4
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 +0.1 -0.5 +0.5 +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 -0.2 +2.0 -0.1 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 -0.4 +2.4 -0.4 +0.0
phage phage 100.3 -0.2 +0.6 +1.1 +0.2 +0.5
nitrogen source Nicotinamide (N) +0.6 +0.7 +1.2 +0.3 +0.9
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