Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu5136	Atu5137	Atu5138	Atu5139	Atu5140
carbon source	1,4-Butanediol (C)	+0.2	-0.9	-1.8	+0.1	-0.1
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	-0.6	-0.5	-0.3	-0.7
carbon source	1,4-Butanediol (C)	+0.2	-0.9	-1.8	-0.0	+0.2
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.7	-0.2	-0.4	-0.4	-0.4
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.8	-0.3	-0.3	-0.4	-0.4
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075	-0.6	-0.4	-0.5	-0.3	-0.2
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.5	-0.3	-0.3	-0.5	-0.3
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	-0.3	-0.6	-0.4	-0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075	-0.5	-0.3	-0.4	-0.3	-0.3
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	-0.6	-0.3	-0.3	-0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0	-0.4	-0.3	-0.3	-0.3	-0.3
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	-0.5	-0.3	-0.5	+0.0
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.6	-0.2	-0.1	-0.4	-0.3
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	-0.4	-0.4	-0.1	-0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0	-0.4	-0.4	-0.3	-0.2	-0.2
in planta	Bethi_Library_OD0.5_6week	-0.6	-0.2	-0.3	-0.1	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.9	-0.2	+0.2	-0.1	-0.3
carbon source	Rhamnogalacturonan - from potato (C)	-0.6	-0.1	+0.1	-0.3	-0.4
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.6	-0.1	+0.2	-0.1	-0.5
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.6	-0.3	-0.2	+0.2
in planta	Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	-0.4	-0.2	-0.4	-0.3
phage	AgroPhage_C10	-0.3	+0.3	-0.4	-0.1	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.8	+0.1	+0.3	-0.1	-0.1
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.8	+0.4	+0.2	+0.1	-0.1
carbon source	Methyl alpha-D-glucopyranoside (C)	-0.7	+0.0	+0.1	+0.2	+0.4
carbon source	D-Sorbitol (C)	-0.4	-0.3	+0.4	+0.3	+0.1
carbon source	D-Saccharic potassium salt (C)	-0.1	-0.5	-0.0	+0.8	-0.0
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	-0.2	+0.6	+0.2	+0.2
carbon source	1,5-Pentanediol (C)	+1.4	-0.2	-0.1	-0.1	-0.0
carbon source	1,5-Pentanediol (C)	+1.3	-0.0	-0.1	-0.0	+0.0