Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu5089	Atu5090	Atu5091	Atu5094	Atu5095
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	-0.5	-0.3	-0.7	-0.8
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.0	-0.1	-0.4	-0.7	-1.1
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.6	-0.1	-0.5	-0.5	-0.3
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.0	-0.4	-0.6	-0.6	-0.5
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075	-0.2	-0.6	-0.0	-0.5	-0.7
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.4	-0.3	-0.4	-0.6
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075	-0.2	-0.4	-0.2	-0.4	-0.6
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0	-0.3	-0.4	-0.2	-0.5	-0.4
lb_wheat	LB_wheat	-0.4	-0.3	-0.2	-0.5	-0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075	-0.1	-0.5	-0.2	-0.4	-0.4
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	-0.6	-0.0	-0.4	-0.3
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.2	-0.5	-0.5	-0.3
benthi_leaf_lb with c58c1od2.0	Benthi_leaf_C58C1OD2.0	-0.3	-0.3	-0.2	-0.4	-0.4
in planta	Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.3	-0.2	-0.4	-0.5	+0.0
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0	-0.2	-0.4	-0.1	-0.4	-0.3
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.3	-0.1	-0.3	-0.5
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.2	-0.2	-0.6	-0.4
	No phage control	-0.2	+0.1	-0.6	+0.1	-0.6
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	-0.3	-0.2	-0.5	+0.1
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	-0.1	-0.2	+0.1	-0.9
nitrogen source	6-aminocaproic (N)	-0.3	-0.3	+0.3	-0.1	-0.6
nitrogen source	5-Aminovaleric (N)	+0.3	-0.3	+0.1	-0.1	-0.6
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.1	+0.1	-0.2	+0.8
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.0	-0.2	+0.2	-0.4	+0.9
nitrogen source	5-Aminolevulinic (N)	+0.4	+0.1	+0.4	+0.3	-0.6
phage	AgroPhage_D04	+0.1	+0.0	+0.5	-0.3	+0.5
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.0	-0.4	-0.1	+1.1
in planta	Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.1	-0.0	+0.3	-0.3	+0.6
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.4	+0.2	-0.1	+0.3	+0.6
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	-0.0	-0.3	+0.1	+1.3