Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu8047	Atu5086	Atu5087	Atu5088	Atu5089
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.8	-0.5	-0.1	-1.4	-0.6
nitrogen source	spermidine (N)	-0.6	+0.0	+0.1	-2.2	+0.0
nitrogen source	6-aminocaproic (N)	-0.5	-0.4	+0.1	-1.1	-0.3
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.2	+0.2	-1.7	-0.2
lb_wheat	LB_wheat	-0.3	-0.4	-0.3	-0.8	-0.4
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-1.5	-0.2	-0.2	-0.0	-0.1
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.5	-0.1	-0.3	-0.6	-0.3
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.6	-0.6	+0.5	-1.1	+0.0
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.6	-0.1	-0.2	-0.8	+0.0
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.2	-0.2	-1.4	-0.0
stress	R2A with Cesium chloride 1.75 mM	-0.2	+0.1	+0.0	-1.5	-0.0
stress	R2A with m-arsenite 0.8 mM	-0.6	+0.0	+0.1	-1.0	+0.0
nitrogen source	L-Alanine (N)	-0.3	-0.1	+0.1	-1.2	+0.3
nitrogen source	5-Aminovaleric (N)	+0.5	-0.2	-0.2	-1.1	-0.1
nitrogen source	Hydantoin (N)	-0.4	+0.0	+0.4	-1.0	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.9	+0.1	-0.2	+0.4	-0.2
nitrogen source	L-Glutamic (N)	+0.4	-0.1	+0.3	-1.2	-0.2
nitrogen source	L-Asparagine (N)	+0.5	-0.1	+0.0	-1.1	-0.0
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.8	+0.0	-0.3	+0.8	-0.4
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.8	-0.4	+0.1	+0.8	-0.0
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.7	+0.2	+0.7	+0.3	-0.3
nitrogen source	DL-2-Aminobutyric (N)	+0.6	+0.1	+0.8	-0.9	-0.2
phage	AgroPhage_D04	-0.5	+0.3	-0.4	+1.2	+0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.4	+0.3	+0.5	+0.6	-0.0
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.2	+0.0	+1.2	+0.2
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.4	+0.0	+0.0	+0.9	+0.4
carbon source	D-Saccharic potassium salt (C)	-0.4	+0.4	-0.0	+1.1	+0.0
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.1	-0.0	+1.7	-0.1
carbon source	Rhamnogalacturonan - from potato (C)	+0.4	-0.3	+0.3	+1.0	+0.1
carbon source	D-Saccharic potassium salt (C)	+0.0	+0.1	+0.5	+1.1	-0.1