Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu8057	Atu5078	Atu5080	Atu5081	Atu5082
	No phage control	-3.7	-0.7	+0.5	-0.0	-0.1
carbon source	D-Saccharic potassium salt (C)	-2.9	+0.5	+0.2	-0.1	+0.1
stress	R2A with Tetracycline 0.002 mM	-0.6	-0.7	-0.2	-0.2	-0.2
	Atjh2	-0.6	-0.1	-0.2	-0.5	-0.3
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	+0.2	-1.0	-0.5	-0.1
stress	R2A with Strontium chloride 750 mM	-0.5	-0.4	-0.4	-0.1	-0.1
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-1.8	+0.0	-0.0	+0.1	+0.2
carbon source	D-Sorbitol (C)	+0.1	-0.5	-0.6	-0.3	-0.1
	Atjh2	-0.5	-0.1	-0.3	-0.2	-0.4
carbon source	methyl-alpha-D-xylopyranoside (C)	-0.2	-0.3	-0.4	-0.4	-0.1
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	-0.1	-0.7	-0.3	-0.3
	Atjh2	-1.0	+0.1	-0.2	+0.1	+0.0
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.8	+0.3	-0.2	+0.2	+0.0
nitrogen source	5-Aminolevulinic (N)	+0.7	-0.4	-0.5	-0.1	-0.1
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.4	-0.3	-0.2	-0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.7	-0.1	+0.5	+0.1	+0.2
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.7	+0.4	+0.3	-0.0	+0.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.3	+0.1	-0.6	+0.4	+0.1
pH	R2A pH 5.5	-0.2	+1.1	-0.2	-0.0	-0.0
pH	R2A pH 5.5	-0.1	+1.0	-0.1	-0.0	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.8	-0.4	+0.0	-0.1	+0.2
carbon source	D-Saccharic potassium salt (C)	+0.6	+0.5	-0.2	-0.2	-0.0
nitrogen source	D-Glucosamine Hydrochloride (N)	+0.7	-0.4	+0.1	+0.4	-0.0
stress	Chloramphenicol 12.5 ug/mL	+0.7	+0.1	+0.4	-0.3	+0.0
nitrogen source	DL-2-Aminobutyric (N)	+1.1	-0.0	+0.0	+0.1	-0.2
nitrogen source	6-aminocaproic (N)	+0.9	+0.3	-0.1	+0.2	-0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.3	+0.3	+0.7	-0.2	-0.0
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+1.2	+0.1	-0.3	+0.0	+0.1
phage	AgroPhage_E10	+1.1	+0.1	+0.2	-0.1	+0.3
nitrogen source	Orotic (N)	+1.0	+0.1	+0.5	+0.2	-0.1