Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu5046	Atu5047	Atu5048	Atu8099	Atu5049
nitrogen source	L-Aspartic Acid (N)	-0.6	-0.2	-0.4	-1.7	+0.1
nitrogen source	L-Glutamic (N)	-1.1	+0.2	+0.2	-1.6	-0.3
nitrogen source	5-Aminovaleric (N)	-0.4	-0.7	-0.1	-0.9	+0.0
nitrogen source	L-Proline (N)	-0.8	-0.0	-0.2	-0.8	-0.1
nitrogen source	Putrescine (N)	-0.2	-0.0	+0.2	-1.7	-0.3
nophagecontrol	No phage control	-0.5	+0.0	-0.1	-1.4	+0.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.9	-0.5	+0.3	-0.6	-0.0
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	-0.9	-0.2	-0.9	+0.2
carbon source	D-Saccharic potassium salt (C)	-0.2	+1.1	-0.3	-2.5	+0.4
carbon source	Rhamnogalacturonan - from potato (C)	+0.5	-0.8	-0.1	-1.2	+0.1
nitrogen source	Urea (N)	+0.3	-1.1	-0.0	-0.8	+0.1
nitrogen source	Nicotinamide (N)	+0.3	-0.8	-0.2	-0.6	-0.1
carbon source	L-Galactose (C)	+0.2	-0.4	-0.1	-1.2	+0.1
lb_sorghum x54 243	LB_Sorghum X54 243	+0.4	-0.6	-0.2	-0.8	-0.2
nitrogen source	D-Glucosamine Hydrochloride (N)	+0.2	-0.4	-0.1	-1.1	+0.2
carbon source	Rhamnogalacturonan - from potato (C)	-0.8	+0.0	+0.2	-0.9	+0.3
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	-0.4	+0.1	-1.1	-0.1
phage	phage 100.3	+0.2	+0.5	-0.2	-1.5	+0.1
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.6	-0.1	-0.1	-1.6	+0.3
carbon source	D-Sorbitol (C)	-1.3	+0.2	-0.2	-0.1	+0.4
nitrogen source	5-Aminolevulinic (N)	+0.8	-0.1	-0.6	-0.7	+0.2
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+1.0	-0.1	-0.1	-1.0	-0.2
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.6	-0.4	+0.5	-0.8	+0.0
no phage	P2L5	-0.1	-1.0	+0.2	+0.8	+0.0
nitrogen source	L-Ornithine (N)	+0.3	-0.5	+0.1	+0.7	-0.2
carbon source	D-Galacturonic Acid (C)	+0.7	+0.2	+0.2	-0.7	+0.2
nitrogen source	DL-2-Aminobutyric (N)	-0.7	-0.6	+1.5	+1.1	-0.2
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.9	-0.2	+0.1	+0.5	+0.3
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+1.9	+0.4	-0.1	-0.5	+0.0
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+1.1	+1.0	+0.5	-0.1	+0.4