Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu5041	Atu5042	Atu5043	Atu5044	Atu5045
nitrogen source	Putrescine (N)	+0.0	+0.0	+0.0	-0.1	-2.9
nitrogen source	Ethanolamine (N)	-0.0	+0.0	+0.1	+0.1	-3.0
phage	AgroPhage_E04	+0.2	-0.2	-1.1	-0.1	-1.2
carbon source	Rhamnogalacturonan - from potato (C)	+0.0	+0.0	-0.3	-0.0	-2.1
carbon source	acetate (C)	+0.2	-0.2	-0.3	-0.1	-1.9
nitrogen source	5-Aminolevulinic (N)	-0.3	-0.6	-0.0	-0.1	-1.2
stress	Chloramphenicol 12.5 ug/mL	-0.2	+0.1	-0.2	-0.2	-1.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.0	-0.0	-0.4	+0.1	-1.9
carbon source	D-Glucose (C)	+0.0	+0.2	-0.2	-0.0	-2.1
nitrogen source	L-Aspartic Acid (N)	-0.0	-0.1	-0.9	+0.0	-1.1
	Atjh14	-0.1	+0.2	-0.4	+0.0	-1.8
nitrogen source	L-Alanine (N)	-0.1	+0.0	-0.0	+0.0	-1.9
nitrogen source	L-Serine (N)	+0.1	-0.2	-0.1	-0.1	-1.6
nitrogen source	L-Valine (N)	-0.1	+0.0	+0.1	+0.3	-2.0
nitrogen source	L-Glutamic (N)	+0.1	+0.0	+0.1	+0.1	-2.0
carbon source	Methyl alpha-D-glucopyranoside (C)	+0.0	+0.2	+0.0	-0.1	-1.9
nitrogen source	5-Aminolevulinic (N)	-0.2	+0.0	+0.2	-0.3	-1.5
nitrogen source	NAG (N)	-0.3	+0.2	-0.7	+0.2	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.0	-0.5	+0.3	+0.2	-1.5
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.2	-0.3	+0.1	-1.4
carbon source	Dextrin from potato starch (C)	+0.2	+0.0	-0.7	+0.2	-0.9
nitrogen source	Putrescine (N)	-0.0	+0.3	+0.4	-0.1	-1.7
nitrogen source	L-Phenylalanine (N)	-0.3	-0.2	+0.5	+0.1	-1.1
nitrogen source	DL-2-Aminobutyric (N)	+0.3	-0.1	+0.2	+0.1	-1.5
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.1	+1.1	-0.1	-1.0
	No phage control	-0.0	+0.2	-0.7	-0.0	+1.3
phage	AgroPhage_D10	-0.2	+0.1	+0.6	-0.1	+1.2
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.4	+0.9	+0.1	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.2	-0.0	-0.1	+0.1	+2.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.2	-0.1	+0.2	+0.2	+2.2