Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu5024	Atu5025	Atu5026	Atu5027	Atu5028
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.1	-1.2	+0.1	-0.9
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	-0.3	-0.4	-0.3	-0.8
phage	AgroPhage_B07	-0.1	-0.1	-0.4	+0.1	-1.3
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.1	-0.4	-0.4	-0.8
lb	LB	-0.1	-0.3	-0.4	-0.3	-0.6
nitrogen source	L-Alanine (N)	-0.2	-0.1	-0.3	+0.0	-1.0
nitrogen source	L-Ornithine (N)	-0.3	+0.0	-0.7	-0.2	-0.4
nitrogen source	L-Proline (N)	-0.1	-0.1	-1.0	-0.3	+0.1
nitrogen source	Orotic (N)	-0.1	+0.2	-0.5	-0.2	-0.8
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.3	-0.2	+0.4	-0.9
nophagecontrol	No phage control	-0.0	+0.3	-0.6	-0.3	-0.4
stress	R2A with Phosphomycin 50 mM	-0.0	-0.1	+0.1	+0.2	-1.0
nitrogen source	Putrescine (N)	-0.0	-0.2	-1.0	+0.1	+0.3
nitrogen source	6-aminocaproic (N)	-0.1	+0.0	-0.8	+0.4	-0.4
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.0	-0.3	-0.6	-0.2	+0.4
lb_arabidopsis_leaf	LB_arabidopsis_leaf	-0.1	-0.1	-0.7	-0.2	+0.4
nitrogen source	L-Phenylalanine (N)	-0.1	-0.1	+0.5	-0.4	-0.4
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	-0.1	+0.1	+0.2	-1.0
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	+0.1	+0.4	-0.3	-0.6
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.4	-0.7	-0.4	+0.2
nitrogen source	L-pyroglutamic (N)	-0.2	-0.2	-0.6	+0.2	+0.4
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.6	+0.1	-0.3	-0.9
nitrogen source	Orotic (N)	+0.0	-0.2	-0.7	+0.3	+0.4
nitrogen source	Putrescine (N)	+0.1	-0.4	-0.4	-0.3	+0.8
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.1	+0.1	+1.0	-0.1	-0.5
nitrogen source	Nicotinamide (N)	-0.1	+0.3	-0.4	+0.0	+0.6
carbon source	D-Saccharic potassium salt (C)	+0.1	+0.1	-0.6	+0.4	+0.6
nitrogen source	DL-2-Aminobutyric (N)	-0.1	+0.3	+0.4	+0.6	-0.4
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.0	+0.4	+0.3	-0.2	+1.2
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	+0.5	+0.6	+0.6	+0.4