Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu5020 and Atu5021 overlap by 4 nucleotidesAtu5021 and Atu5022 overlap by 1 nucleotidesAtu5022 and Atu5023 are separated by 301 nucleotidesAtu5023 and Atu5024 are separated by 29 nucleotides Atu5020: Atu5020 - hypothetical protein, at 20,001 to 21,335 Atu5020 Atu5021: Atu5021 - hypothetical protein, at 21,332 to 22,228 Atu5021 Atu5022: Atu5022 - hypothetical protein, at 22,228 to 24,126 Atu5022 Atu5023: Atu5023 - hypothetical protein, at 24,428 to 26,161 Atu5023 Atu5024: Atu5024 - ATP-dependent DNA helicase, at 26,191 to 27,891 Atu5024
Group Condition Atu5020 Atu5021 Atu5022 Atu5023 Atu5024
nitrogen source L-Arginine (N) -0.1 -0.0 -0.0 -0.6 -0.4
nitrogen source L-Ornithine (N) -0.4 -0.3 -0.0 -0.2 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.3 +0.2 -0.5 -0.1
pH R2A pH 5.5 -0.2 -0.1 -0.1 -0.3 -0.3
carbon source D-Raffinose (C) -0.3 -0.3 -0.2 +0.1 -0.2
lb LB -0.2 -0.2 +0.0 -0.3 -0.1
nitrogen source L-Phenylalanine (N) -0.3 -0.5 -0.1 +0.0 +0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.0 -0.4 -0.0 -0.4 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.5 -0.1 -0.2 -0.1
phage AgroPhage_H04 +0.1 -0.4 +0.1 -0.2 -0.2
nitrogen source L-Arginine (N) +0.0 +0.1 +0.1 -0.4 -0.5
carbon source gluconate (C) -0.1 -0.3 -0.2 +0.1 -0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.2 -0.1 -0.0 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.1 -0.3 +0.1 -0.4 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.2 +0.3 -0.3 -0.1
lb_cucumber_cotlyden LB_cucumber_cotlyden -0.1 -0.2 +0.1 -0.4 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.1 -0.2 +0.1 -0.4 +0.1
nitrogen source Hydantoin (N) +0.1 -0.3 +0.1 +0.2 -0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.4 +0.1 +0.1 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 +0.3 +0.2 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.3 +0.1 -0.0 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.5 +0.0 -0.0 -0.3
nitrogen source DL-2-Aminobutyric (N) -0.0 +0.3 +0.2 +0.3 -0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.2 +0.3 +0.3 -0.2
nitrogen source L-Glutamic (N) -0.0 +0.4 +0.2 +0.1 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.7 +0.1 +0.1 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.5 +0.2 -0.1 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 +0.5 +0.3 -0.0 +0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.1 +0.1 +0.1 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.5 +0.2 +0.2 +0.2
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