Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu5007 and Atu8044 are separated by 261 nucleotidesAtu8044 and Atu5008 are separated by 55 nucleotidesAtu5008 and Atu5010 are separated by 1064 nucleotidesAtu5010 and Atu5011 are separated by 364 nucleotides Atu5007: Atu5007 - santhopine-responsive transcriptional repressor, at 8,980 to 10,044 Atu5007 Atu8044: Atu8044 - hypothetical protein, at 10,306 to 10,611 Atu8044 Atu5008: Atu5008 - hypothetical protein, at 10,667 to 11,452 Atu5008 Atu5010: Atu5010 - hypothetical protein, at 12,517 to 12,717 Atu5010 Atu5011: Atu5011 - polyketide biosynthesis dithiol-disulfide isomerase, at 13,082 to 13,723 Atu5011
Group Condition Atu5007 Atu8044 Atu5008 Atu5010 Atu5011
nitrogen source L-Ornithine (N) -2.1 N.D. -0.1 -0.8 -0.2
nitrogen source L-Ornithine (N) -1.2 N.D. +0.2 -1.3 -0.4
nitrogen source 5-Aminovaleric (N) -1.0 N.D. +0.0 -1.0 -0.6
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -2.3 N.D. -0.2 +0.1 +0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.6 N.D. -0.0 -0.3 -0.2
carbon source D-Saccharic potassium salt (C) -1.5 N.D. -0.3 -0.6 +0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -2.1 N.D. -0.1 -0.2 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 N.D. -0.5 -0.5 -0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.8 N.D. -0.5 +0.2 +0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 N.D. -0.5 -1.3 -0.1
stress R2A with m-arsenite 0.8 mM -0.6 N.D. -0.1 -0.7 -0.4
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.5 N.D. -0.0 -0.6 +0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 N.D. -0.7 -0.4 +0.2
nitrogen source D-Lysine (N) -1.5 N.D. -0.0 -0.2 +0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.0 N.D. +0.2 -1.0 +0.4
nitrogen source Orotic (N) +0.3 N.D. -0.2 -1.2 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.1 N.D. -0.1 -0.5 +0.4
nitrogen source L-Histidine (N) +0.4 N.D. -0.4 -0.7 -0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 N.D. -0.1 -1.2 -0.4
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 N.D. -0.5 -0.2 +0.6
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.4 N.D. +0.0 -1.1 -0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.3 N.D. -0.3 +0.8 -0.0
phage AgroPhage_E10 -0.1 N.D. +0.4 -1.4 +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 N.D. +0.6 -1.4 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. +0.1 -1.0 +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 N.D. -0.0 -1.0 +0.2
nitrogen source DL-2-Aminobutyric (N) -1.0 N.D. -0.0 +1.1 +0.0
nitrogen source L-Methionine (N) +1.1 N.D. -0.1 -0.4 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. -0.5 +0.1 +1.4
nitrogen source L-Phenylalanine (N) +1.4 N.D. +0.1 -0.1 +0.4
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