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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu4881 and Atu4882 are separated by 429 nucleotides
Atu4882 and Atu4884 are separated by 391 nucleotides
Atu4884 and Atu8201 are separated by 282 nucleotides
Atu8201 and Atu8202 overlap by 4 nucleotides
Atu4881: Atu4881 - hypothetical protein, at 2,062,328 to 2,062,729
Atu4881
Atu4882: Atu4882 - hypothetical protein, at 2,063,159 to 2,063,341
Atu4882
Atu4884: Atu4884 - hypothetical protein, at 2,063,733 to 2,064,176
Atu4884
Atu8201: Atu8201 - hypothetical protein, at 2,064,459 to 2,064,656
Atu8201
Atu8202: Atu8202 - hypothetical protein, at 2,064,653 to 2,064,910
Atu8202
Group
Condition
Atu4881
Atu4882
Atu4884
Atu8201
Atu8202
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.6
-2.9
-2.2
N.D.
-1.5
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-1.4
-2.3
-1.7
N.D.
-1.6
phage
Phage 97.2 + bacteria
-1.1
-3.1
-1.1
N.D.
-1.1
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.7
-2.9
-0.9
N.D.
-1.4
phage
Phage 100.1 + bacteria
-1.0
-2.8
-1.3
N.D.
-0.8
phage
Phage 99.2 + bacteria
-0.8
-2.1
-1.2
N.D.
-1.2
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.6
-1.8
-1.8
N.D.
-1.1
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-1.0
-2.2
-0.3
N.D.
-1.5
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.9
-2.3
-0.9
N.D.
-0.9
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-1.2
-1.6
-1.2
N.D.
-0.9
phage
Phage 100.3 + bacteria
-0.5
-1.9
-1.6
N.D.
-0.8
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-1.4
-0.1
-2.0
N.D.
-1.2
lb_sorghum nk 300
LB_Sorghum NK 300
-1.1
-1.3
-1.2
N.D.
-1.0
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.5
-3.6
+1.2
N.D.
-1.3
carbon source
Ribitol (C)
+1.0
+1.1
+1.2
N.D.
+1.2
carbon source
Cellotetraose (C)
+1.1
+1.1
+1.0
N.D.
+1.3
carbon source
Ribitol (C)
+1.2
+1.0
+1.0
N.D.
+1.4
carbon source
Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
+1.0
+1.0
+1.6
N.D.
+1.1
carbon source
D-Maltose (C)
+1.1
+1.3
+1.0
N.D.
+1.3
carbon source
Lactulose (C)
+1.1
+1.4
+1.0
N.D.
+1.3
nophagecontrol
No phage control
+1.1
+1.5
+1.2
N.D.
+1.0
nophagecontrol
No phage control
+1.0
+1.1
+1.2
N.D.
+1.6
phage
AgroPhage_C10
+1.1
+0.8
+1.5
N.D.
+1.6
carbon source
m-Inositol (C)
+1.2
+1.2
+1.1
N.D.
+1.4
nophagecontrol
No phage control
+1.1
+1.4
+1.0
N.D.
+1.6
phage
AgroPhage_C04
+0.9
+0.7
+1.8
N.D.
+1.6
nophagecontrol
No phage control
+1.1
+1.1
+1.4
N.D.
+1.5
carbon source
Lactitol (C)
+1.3
+1.4
+1.3
N.D.
+1.6
carbon source
Betanin (C)
+1.5
+1.4
+1.0
N.D.
+1.8
carbon source
Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
+1.4
+1.4
+1.6
N.D.
+1.4
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