Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4881 and Atu4882 are separated by 429 nucleotidesAtu4882 and Atu4884 are separated by 391 nucleotidesAtu4884 and Atu8201 are separated by 282 nucleotidesAtu8201 and Atu8202 overlap by 4 nucleotides Atu4881: Atu4881 - hypothetical protein, at 2,062,328 to 2,062,729 Atu4881 Atu4882: Atu4882 - hypothetical protein, at 2,063,159 to 2,063,341 Atu4882 Atu4884: Atu4884 - hypothetical protein, at 2,063,733 to 2,064,176 Atu4884 Atu8201: Atu8201 - hypothetical protein, at 2,064,459 to 2,064,656 Atu8201 Atu8202: Atu8202 - hypothetical protein, at 2,064,653 to 2,064,910 Atu8202
Group Condition Atu4881 Atu4882 Atu4884 Atu8201 Atu8202
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -2.9 -2.2 N.D. -1.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.4 -2.3 -1.7 N.D. -1.6
phage Phage 97.2 + bacteria -1.1 -3.1 -1.1 N.D. -1.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 -2.9 -0.9 N.D. -1.4
phage Phage 100.1 + bacteria -1.0 -2.8 -1.3 N.D. -0.8
phage Phage 99.2 + bacteria -0.8 -2.1 -1.2 N.D. -1.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -1.8 -1.8 N.D. -1.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.0 -2.2 -0.3 N.D. -1.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 -2.3 -0.9 N.D. -0.9
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.2 -1.6 -1.2 N.D. -0.9
phage Phage 100.3 + bacteria -0.5 -1.9 -1.6 N.D. -0.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.4 -0.1 -2.0 N.D. -1.2
lb_sorghum nk 300 LB_Sorghum NK 300 -1.1 -1.3 -1.2 N.D. -1.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -3.6 +1.2 N.D. -1.3
carbon source Ribitol (C) +1.0 +1.1 +1.2 N.D. +1.2
carbon source Cellotetraose (C) +1.1 +1.1 +1.0 N.D. +1.3
carbon source Ribitol (C) +1.2 +1.0 +1.0 N.D. +1.4
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) +1.0 +1.0 +1.6 N.D. +1.1
carbon source D-Maltose (C) +1.1 +1.3 +1.0 N.D. +1.3
carbon source Lactulose (C) +1.1 +1.4 +1.0 N.D. +1.3
nophagecontrol No phage control +1.1 +1.5 +1.2 N.D. +1.0
nophagecontrol No phage control +1.0 +1.1 +1.2 N.D. +1.6
phage AgroPhage_C10 +1.1 +0.8 +1.5 N.D. +1.6
carbon source m-Inositol (C) +1.2 +1.2 +1.1 N.D. +1.4
nophagecontrol No phage control +1.1 +1.4 +1.0 N.D. +1.6
phage AgroPhage_C04 +0.9 +0.7 +1.8 N.D. +1.6
nophagecontrol No phage control +1.1 +1.1 +1.4 N.D. +1.5
carbon source Lactitol (C) +1.3 +1.4 +1.3 N.D. +1.6
carbon source Betanin (C) +1.5 +1.4 +1.0 N.D. +1.8
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) +1.4 +1.4 +1.6 N.D. +1.4
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