Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4843 and Atu4844 are separated by 13 nucleotidesAtu4844 and Atu4845 are separated by 14 nucleotidesAtu4845 and Atu4846 are separated by 4 nucleotidesAtu4846 and Atu4847 are separated by 24 nucleotides Atu4843: Atu4843 - sugar ABC transporter ATPase, at 2,022,797 to 2,024,296 Atu4843 Atu4844: Atu4844 - sugar ABC transporter permease, at 2,024,310 to 2,025,287 Atu4844 Atu4845: Atu4845 - sugar ABC transporter permease, at 2,025,302 to 2,026,300 Atu4845 Atu4846: Atu4846 - hypothetical protein, at 2,026,305 to 2,027,387 Atu4846 Atu4847: Atu4847 - ribokinase, at 2,027,412 to 2,028,350 Atu4847
Group Condition Atu4843 Atu4844 Atu4845 Atu4846 Atu4847
stress R2A with silver chloride 5 mM -0.7 -0.5 -0.8 -0.6 -0.6
stress R2A with Nickel (II) chloride 0.05 mM -0.5 -0.6 -0.5 -0.6 -0.5
stress R2A with Carbenicillin 150 mM -0.4 -0.5 -0.4 -0.6 -0.6
stress R2A with Cobalt chloride 0.02 mM -0.4 -0.6 -0.5 -0.5 -0.4
stress R2A with arsenate 50 mM -0.5 -0.4 -0.4 -0.5 -0.5
stress R2A with Aluminum chloride 0.3 mM -0.7 -0.4 -0.3 -0.4 -0.5
stress R2A with Zinc chloride 0.05 mM -0.4 -0.5 -0.5 -0.4 -0.5
carbon source D-Ribose (C) -0.4 -0.3 -0.8 -0.3 -0.4
stress R2A with Chloride 800 mM -0.5 -0.4 -0.4 -0.5 -0.4
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.5 -0.3 -0.5 -0.6 -0.4
stress R2A with Oxytetracycline 0.0002 mM -0.5 -0.5 -0.3 -0.4 -0.4
carbon source D-Ribose (C) -0.5 -0.3 -0.7 -0.1 -0.6
stress R2A with Gallium(III) chloride 0.02 mM -0.5 -0.5 -0.3 -0.4 -0.2
r2a_control R2A control -0.4 -0.4 -0.4 -0.4 -0.5
stress R2A with copper (II) chloride 0.04 mM -0.5 -0.3 -0.4 -0.5 -0.4
nophagecontrol No phage control +0.4 +0.4 +0.4 +0.5 +0.4
stress Pyrogallol 0.5 mM +0.4 +0.4 +0.4 +0.5 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.6 +0.2 +0.4 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 +0.4 +0.4 +0.3 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.6 +0.6 +0.6 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.2 +0.4 +1.1 +0.6
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.1 +0.6 +0.4 +0.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.4 +0.5 +0.5 +0.4
nophagecontrol No phage control +0.4 +0.7 +0.4 +0.4 +0.5
carbon source Betanin (C) +0.4 +0.5 +0.5 +0.5 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.5 +0.4 +0.4 +0.5 +0.6
nophagecontrol No phage control +0.5 +0.6 +0.4 +0.5 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 +0.3 +0.5 +0.6 +0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 +0.4 +0.7 +0.6 +0.4
nophagecontrol No phage control +0.6 +0.6 +0.6 +0.8 +0.5
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