Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4831 and Atu4832 are separated by 387 nucleotidesAtu4832 and Atu4833 are separated by 373 nucleotidesAtu4833 and Atu4834 are separated by 37 nucleotidesAtu4834 and Atu4835 overlap by 4 nucleotides Atu4831: Atu4831 - hypothetical protein, at 2,010,876 to 2,011,265 Atu4831 Atu4832: Atu4832 - hypothetical protein, at 2,011,653 to 2,012,027 Atu4832 Atu4833: Atu4833 - glucoamylase, at 2,012,401 to 2,014,803 Atu4833 Atu4834: Atu4834 - 6-phosphogluconate dehydrogenase, at 2,014,841 to 2,015,845 Atu4834 Atu4835: Atu4835 - glucose-6-phosphate 1-dehydrogenase, at 2,015,842 to 2,017,227 Atu4835
Group Condition Atu4831 Atu4832 Atu4833 Atu4834 Atu4835
stress R2A with tungstate 375 mM -0.9 -0.2 -0.3 -0.3 -0.8
stress R2A with Ferric chloride 0.1 mM -0.3 -0.5 -0.4 -0.5 -0.4
r2a_control R2A control -0.6 -0.4 -0.3 -0.3 -0.3
stress R2A with Nickel (II) chloride 0.05 mM -0.2 -0.5 -0.5 -0.4 -0.4
stress R2A with copper (II) chloride 0.04 mM -0.5 -0.4 -0.5 -0.3 -0.3
stress R2A with G418 disolution 0.02 mM -0.6 -0.6 -0.3 -0.2 -0.3
stress R2A with Sisomicin 0.001 mM -0.3 -0.5 -0.5 -0.3 -0.4
stress R2A with Cobalt chloride 0.02 mM -0.2 -0.6 -0.3 -0.4 -0.4
stress R2A with silver chloride 5 mM -0.2 -0.4 -0.5 -0.3 -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 +0.3 +0.4 +0.6
nophagecontrol No phage control +0.4 +0.2 +0.4 +0.3 +0.5
nophagecontrol No phage control +0.4 +0.3 +0.5 +0.1 +0.6
stress Acetosyringone 1.25 mM +0.5 +0.4 +0.3 +0.3 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 +0.3 +0.5 +0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.4 +0.5 +0.4 +0.3 +0.4
lb_sorghum_leaf LB_sorghum_leaf +0.2 +0.4 +0.4 +0.5 +0.5
lb_sorghum_leaf LB_sorghum_leaf +0.4 +0.3 +0.4 +0.5 +0.4
lb_sorghum_leaf LB_sorghum_leaf +0.3 +0.4 +0.5 +0.5 +0.3
nophagecontrol No phage control +0.6 +0.3 +0.4 +0.3 +0.5
lb_arabidopsis_leaf LB_arabidopsis_leaf +0.2 +0.5 +0.4 +0.5 +0.4
stress Pyrogallol 0.5 mM +0.3 +0.5 +0.4 +0.5 +0.4
lb_sorghum_leaf LB_sorghum_leaf +0.3 +0.5 +0.5 +0.5 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.4 +0.5 +0.7 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 +0.5 +0.5 +0.4 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.5 +0.5 +0.5 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.6 +0.5 +0.6 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.7 +0.5 +0.6 +0.5
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.4 +0.6 +0.9 +0.4
nophagecontrol No phage control +0.5 +0.6 +0.5 +0.5 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 +0.3 +0.7 +0.7 +0.4
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