Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu4823	Atu4824	Atu4825	Atu4826	Atu4827
carbon source	D-Saccharic potassium salt (C)	-0.6	-2.5	-2.0	-0.2	-0.2
carbon source	D-Saccharic potassium salt (C)	-0.7	-2.6	-1.7	-0.0	+0.0
carbon source	D-Galacturonic Acid (C)	-0.3	-1.8	-1.6	-0.3	-0.2
carbon source	Beta-alanine (C)	-0.8	-1.8	-1.4	-0.0	-0.0
carbon source	D-Galacturonic Acid (C)	-0.3	-1.8	-1.4	-0.1	-0.1
carbon source	Beta-alanine (C)	-0.6	-1.5	-1.5	-0.0	+0.1
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.7	-1.2	-1.1	-0.1	-0.0
carbon source	L-Alanine (C)	-0.4	-1.2	-1.0	-0.1	-0.0
stress	R2A with Nickel (II) chloride 0.05 mM	-0.5	-0.8	-0.6	-0.4	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	-0.9	-1.2	-0.3	+0.0
carbon source	L-Alanine (C)	-0.3	-1.1	-0.9	-0.1	+0.0
carbon source	Dihydroxyacetone (C)	-0.1	-1.2	-1.1	+0.0	+0.1
stress	R2A with silver chloride 5 mM	-0.4	-0.3	-0.5	-0.5	-0.6
carbon source	4-Aminobutyric (C)	-0.2	-0.8	-1.2	-0.0	+0.1
r2a_control	R2A control	-0.4	-0.3	-0.6	-0.4	-0.2
r2a_control	R2A control	-0.2	-0.6	-0.6	-0.4	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.0	-0.9	-0.8	-0.2	-0.1
carbon source	L-Sorbose (C)	-0.1	-1.0	-0.9	+0.0	+0.0
carbon source	4-Aminobutyric (C)	-0.2	-0.8	-0.9	+0.1	+0.0
carbon source	L-(+)-Erythrulose (C)	-0.1	-0.9	-1.0	+0.1	+0.1
carbon source	Dihydroxyacetone (C)	-0.1	-1.1	-0.8	+0.0	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5	-0.8	-0.4	-0.2	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.5	-0.7	-0.9	+0.1	+0.2
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.4	-0.4	-0.5	+0.6	-0.3
stress	Pyrogallol 0.5 mM	+0.2	+0.6	+0.5	+0.4	+0.4
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.4	+0.5	+0.3	+0.6	+0.4
nophagecontrol	No phage control	+0.5	+0.6	+0.3	+0.5	+0.4
phage	AgroPhage_E10	-0.1	+0.4	+1.0	+0.6	+0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.8	+0.6	+0.4	+0.4	+0.6
carbon source	L-ascorbate (C)	+0.1	+3.5	+3.1	-0.1	-0.0