Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu4806 and Atu4807 overlap by 4 nucleotidesAtu4807 and Atu4808 are separated by 225 nucleotidesAtu4808 and Atu4809 are separated by 270 nucleotidesAtu4809 and Atu4810 are separated by 4 nucleotides Atu4806: Atu4806 - glycosyltransferase, at 1,983,438 to 1,984,397 Atu4806 Atu4807: Atu4807 - exopolysaccharide export protein, at 1,984,394 to 1,985,905 Atu4807 Atu4808: Atu4808 - exopolysaccharide synthesis protein, at 1,986,131 to 1,987,363 Atu4808 Atu4809: Atu4809 - glycosyltransferase, at 1,987,634 to 1,988,833 Atu4809 Atu4810: Atu4810 - hypothetical protein, at 1,988,838 to 1,990,157 Atu4810
Group Condition Atu4806 Atu4807 Atu4808 Atu4809 Atu4810
stress R2A with Gallium(III) chloride 0.02 mM -0.3 -0.5 -0.3 -0.4 -0.1
stress R2A with copper (II) chloride 0.04 mM -0.3 -0.3 -0.3 -0.3 -0.3
phage phage 95.1 -0.4 +0.4 -0.1 -0.2 -0.5
phage AgroPhage_C04 +0.1 +0.8 -0.4 -0.2 +0.0
phage AgroPhage_E04 +0.1 +0.2 +0.4 -0.4 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 -0.3 +0.0 -0.0 +0.6
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.4 +0.1 +0.3 +0.4 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.3 +0.2 +0.3 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.3 +0.3 +0.3 +0.5 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.6 -0.2 +0.6 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.4 +0.3 +0.3 +0.4 +0.2
lb LB +0.3 +0.2 +0.3 +0.5 +0.2
lb_arabidopsis_leaf LB_arabidopsis_leaf +0.4 +0.3 +0.4 +0.5 +0.2
lb_arabidopsis_leaf LB_arabidopsis_leaf +0.4 +0.3 +0.3 +0.4 +0.2
stress syringaldehyde 1.25 mM +0.3 +0.4 +0.3 +0.3 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.4 +0.3 +0.2 +0.4
nophagecontrol No phage control +0.4 +0.3 +0.3 +0.3 +0.5
lb_arabidopsis_leaf LB_arabidopsis_leaf +0.5 +0.2 +0.4 +0.4 +0.3
lb_sorghum_leaf LB_sorghum_leaf +0.3 +0.4 +0.5 +0.4 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.3 +0.5 +0.4 +0.4
lb_arabidopsis_leaf LB_arabidopsis_leaf +0.4 +0.3 +0.4 +0.4 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.5 +0.2 +0.1 +0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.6 +0.5 +0.1 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.4 +0.6 +0.3 +0.3
lb_sorghum_leaf LB_sorghum_leaf +0.4 +0.3 +0.5 +0.5 +0.3
stress Pyrogallol 0.5 mM +0.4 +0.5 +0.4 +0.4 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 +0.3 +0.5 +0.7 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.4 +0.6 +0.5 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 +0.6 +0.4 +0.8 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.5 +0.5 +0.7 +0.5
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